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hierarchy of life
- biosphere
- biome
- ecosystem
- community
- population
- organisms
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species
- a group of organisms sharing common characteristics that can interbreed and produce fertile offspring
- problematic:
- sub-species (dogs can't reproduce anymore)
- crossing two organisms who have infertile offspring
- ring species - series of neighbouring populations that can interbreed but for which exist 2 'end' populations that are too distantly related to interbreed (gulls)
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population
a group of organisms from the same species living in the same area at the same time
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population dynamics
population size and how it changes
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habitat
environment in which a species usually lives
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ecological niche
- where, when and how an organism lives
- specific to a species
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biotic factors
- living parts of the environment and the interactions between organisms
- predators, parasites, competitors, humans
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abiotic factors
- non-living parts of the environment
- salinity, day length, parent material, humidity etc
- determine the fundamental and realized niches
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carrying capacity
- the max number of individuals in a species that can be sustained by an environment
- difficult to establish
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fundamental niche
- when, where and how an organism could theoretically live
- always larger
- includes the entirety of tolerance range including the range of psychological stress
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realized niche
when, where and how an organism actually lives
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tolerance
- optimal range < tolerance range
- tolerance range includes the range of psychological stress
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predation
- predator-prey
- influences population size
- negative feedback causes time lags in population dynamics
- sometimes positive impact on prey - eats the old and sick
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herbivory
- animal feeds on plant
- grazing
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symbiosis
- a relationship in which two organisms live together
- mutualism, parasitism, commensalism
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mutualism
- both organisms benefit
- obligatory (lichen)
- facultative (oxpeckers and zebras)
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parasitism
1 organism benefits, the other is harmed
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commensalism
- 1 organism benefits, the other doesn't benefit but isn't harmed
- barnacles and whales
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disease
- pathogen: an organism which causes disease
- population control
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population growth curves
- s curve and j curve
- models showing population growth over time and the typical reaction of a population to certain circumstances
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s-population curve
- sigmoid growth curve
- lag phase: small numbers, reproduction is slow, resources are not limiting
- exponential growth: the fastest rate of population increase, resources are not limiting
- transitional phase: limiting factors slow growth, reproduction slows, increased competition, predators, disease, and mortality
- stationary phase: the population has reached carrying capacity, stabilization, and fluctuation
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j-population curve
- exponential growth: initially slow, becomes increasingly rapid
- doesn't slow as population increases
- resources are not limiting
- can be followed by a population crash due to mostly abiotic factors
- no transition phase or equilibrium
- often in species with little parental care, many offsprings
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limiting factors
- limit distribution/numbers of population
- slow population growth as it approaches carrying capacity
- density-dependent: lower birth rate/raise death rate, lack of food/water, disease, parasites, competition
- density independent: change in temperature, natural disasters
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hydrophytes
- water-tolerant plants with root in the water
- mangroves
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mesophytes
- inhabit moist but not wet environments
- plain rose
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xerophytes
- inhabit dry environments
- cacti
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competition
- neither species benefits but better competitor suffers less
- interspecific: between species, overlap in niches, when resources are limiting
- intraspecifc: within the same species, more common (same niche)
- competitive exclusion: superior species eliminates other species
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communities
- group of populations living and interacting with each other in a common habitat
- include all biotic parts of the ecosystem
- influenced by abiotic factors
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ecosystem
- community + the physical environment it interacts with
- biotic components: interdependent - depend on each other and abiotic components
- abiotic components: define which ecosystem can develop
- 3 types: terrestrial, marine, freshwater (aquatic)
- terrestrial: forests, grasslands, tundras..
- marine: sea, salt marshes, estuaries, mangroves
- freshwater: rivers, lakes, wetlands
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estuary
- partially enclosed coastal brackish water
- has at least one stream flowing into it and free connection to the sea
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salt-marshes
- upper coastal area
- inter-tidal zone (regular flooding)
- brackish water
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mangroves
- tropical coastal vegetation
- along the coast or in brackish water
- protect from erosion and hurricanes
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photosynthesis
converts light energy to chemical energy which is stored in biomass
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respiration
- releases energy so that it can be used to support the life processes of organisms
- aerobic process in mitochondria - starts off as anaerobic in the cytoplasm
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chemosynthesis
- in hydrothermal vents at the bottom of the ocean
- without sunlight
- bacteria harvest energy from the hot, mineral-rich water escaping through the crust
- they convert it to biomass for other organisms to consume
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producers
- autotrophs
- make their own food by converting abiotic components into living matter
- constant input of energy and new biological matter
- phototrophs: use light energy, any green plants, algae, some bacteria
- chemoautotrophs: use chemical energy, chemosynthesis, some bacteria
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consumers
- heterotrophs
- cannot make their own food
- eat other organisms to obtain energy and matter
- herbivores: feed on autotrophs
- carnivores: feed on other heterotrophs
- omnivores: feed on both autotrophs and heterotrophs
- insectivores - eat insects
- top predator: at the top of a food chain, feeds on others but is generally not consumed by them while alive
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decomposers
- heterotrophs
- obtain food and nutrients from breakdown of dead organic matter
- release nutrients
- essential for cycling matter
- contribute to the build-up of humus in soil
- bacteria, fungi, pill bug, earthworms, gastropods (snail), millipedes, protozoans
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trophic level
- position an organism occupies in a food chain
- position in the food chain occupied by a group of organisms in a community
- a single organism can occupy more trophic levels in an ecosystem
- energy and matter flow between them
- T1 - always producers
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food chain
- flow of matter and energy from one trophic level to another
- producer --> primary consumer --> secondary consumer --> tertiary consumer --> quaternary consumer
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food web
- diagram that shows food chains linked together in an ecosystem
- shows whether/which organisms are impacted by the removal of another organism
- knock-on effect
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ecological pyramids
- graphical models of quantitative differences between trophic levels of a single ecosystem
- usually measured for a given area and time
- show feeding relationships in a community
- pyramid of numbers, pyramid of biomass, pyramid of productivity
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pyramid of numbers
- records the number of individuals at each trophic level in an ecosystem
- quantitative data for each trophic level are drawn to scale as horizontal bars arranged symmetrically around a central axis
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pyramid of biomass
- biological mass of the standing stock at each trophic level at a particular point in time
- measured in units like g/m2 or J/m2
- can have season variation and can be inverted
- sampling: measure whole habitat size, take quantitative samples, dry samples to remove water weight, extrapolate dry mass sample to entire trophic level
- evaluation: it is an estimate based on assumption that all individuals at the trophic level are the same, the sample accurately represents the whole habitat
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pyramid of productivity
- flow of energy (rate at which the stock is being generated) through each trophic level over a period of time
- measured in units of flow like g/m2yr or J/m2yr
- energy decreases along a food chain - cannot be inverted
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effect of pyramid structure on ecosystem functions
- limited length of food chains
- the vulnerability of top carnivores
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bioaccumulation
- build up of persistent pollutants within an organism or trophic level because they cannot be broken down
- pops soluble in fats and liquids - pass through cell membrane
- Minamata disease
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biomagnification
- increase in the concentration of persistent pollutants along a food chain
- silent spring
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solar radiation
- energy emitted by the sun, particularly electromagnetic energy
- biological systems depend on the amount reaching the surface
- 1/2 of radiation is in the visible short-wave part of the electromagnetic spectrum
- 1/2 is in near-infrared part, some in ultraviolet part
- portion of ultraviolet light not absorbed by atmosphere produces suntan or sunburn
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reflection and absorption of solar radiation
- absorption (69%): molecules and dust in the atmosphere (17%), clouds (3%), ground (49%)
- relfection (31%): by scatter (3%), clouds (19%), ground (9%)
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albedo effect
- ratio of irradiance reflected to irradiance received by surface
- proportion determined by properties of surface, spectral and angular distribution of solar radiation
- measure of reflectivity of a surface
- high albedo - most light reflected
- low albedo - most light absorbed
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Earth's energy budget
- accounts for the balance between energy the Earth receives from the Sun and the energy it radiates back into outer space after having been redistributed through the 5 components of the Earth's climate system and having powered the "Earth's heat engine"
- unit: Watt/m2
- not all solar radiation reaches producers
- not all radiation that reaches producers ends up being stored as biomass - losses of reflection from leaves, wrong wavelength
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ecological efficiency
- once light energy has been converted into chemical energy and stored as biomass it is in a usable form - can be transferred along the food chain
- none of these processes are 100% efficient
- Ecological efficiency = energy used for growth (biomass)/energy supplied x100
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storage
- standing stock at each trophic level at a particular point in time
- g/m2 (biomass) or J/m2 (amount of energy)
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flows
- flow of energy or matter over a period of time
- g/m2yr or J/m2yr
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pathways of energy through an ecosystem
- conversion of light e. to chemical e.
- transfer of chemical e. from one trophic level to another with varying efficiency
- overall conversion of ultraviolet and visible light to hear e. by an ecosystem
- re-radiation of heat e. to the atmosphere
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productivity
- primary - total biomass/energy gained by producers in a specific area in a specific amount of time
- secondary - total biomass/energy gained by consumers in a specific area in a specific amount of time
- gross - total amount of something made as a result of an activity
- net - amount left after deduction (always lower)
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primary productivity
- gross primary productivity (GPP): total gain in biomass made by producers through photosynthesis in a specific area in a specific amount of time
- net primary productivity (NPP): total gain in biomass/energy by producers in a specific area in a specific amount of time after allowing for respiratory losses
- NPP = GPP-R
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secondary productivity
- gross secondary productivity (GSP): the total gain in biomass by consumers through absorption (in g) in a specific area in a specific amount of time
- GSP = food eaten - fecal loss
- net secondary productivity (NSP): total gain in biomass by consumers once energy from respiratory loss has been removed (in g) in a specific area in a specific amount of time
- NSP = GSP - R
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reasons for high net productivity
- high primary productivity - more energy available
- higher efficiency of energy transfer between trophic levels
- higher primary productivity & higher efficiency of energy transfer - more trophic levels
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sustainable yield
- rate of increase in biomass that can be exploited without depleting the original stock or its potential for replenishment
- resources can be harvested at a rate equal or lower to their natural productivity
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maximum sustainable yield
- max flow of a given resource such that the stock does not decline over time
- = to net primary/net secondary productivity
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biogeochemical cycles
- nutrients absorbed by organisms from soil/atmosphere circulate through trophic levels
- are released back mostly via detritus food chain
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energy vs matter
- energy: flows through system, quality degrades from light to heat, endless supply from the sun
- matter: cycles, Gersmehl's nutrient model, characteristic for each ecosystem
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nitrogen forms
- ammonium (NH4+)
- nitrous oxide (N2O)
- nitric oxide (NO)
- nitrogen gas (N2)
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ammonium (NH4+)
- waste product of metabolism of animals (excretion)
- oxidizes from nitrite (NO2-) to nitrate (NO3-)
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nitrous oxide (N2O)
- air pollutant
- 30% human activity
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nitric oxide (NO)
- bioproduct in almost all organisms
- toxic environmental pollutant (acid rain)
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nitrogen gas (N2)
- in all organisms (amino acids)
- in the atmosphere (78%)
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nitrogen transformations
- nitrogen fixation
- nitrogen-fixing bacteria
- nitrifying bacteria
- denitrifying bacteria
- deamination
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nitrogen transfers
assimilation
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nitrogen fixation
- caused by lightning
- transformation of N2 to NO3 (nitrates)
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nitrogen-fixing bacteria
- transformation of N2 into ammonium ions
- symbiotic (rhizobium) vs free living (azotobacter) bacteria
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denitrifying bacteria
nitrate (NO3-) to nitrogen (N2)
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deamination
break down of organic nitrogen (protein) into ammonia
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assimilation
- absorption by plants - transfer
- absorbed nitrates used for building amino acids and proteins - transformation
- available to the rest of the food chain through feeding - transfer
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human impact on nitrogen cycle
- deforestation - rainforest nutrient cycle by transferring nitrogen
- combustion of fossil fuels - increase of CO2 and temperatures
- monocultures
- use of fertilisers (often nitrogen based) - transferred into soil, with crops, washed away with rain (leeching)
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eutrophication
leaching of nitrogen leads to underwater plants dying, increase in algae, less oxygen, fish dying - cycle
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biomes
- collections of ecosystems sharing similar climatic conditions that can be grouped into five major classes
- classes: aquatic, forest, grassland, desert, tundra
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abiotic factors in biomes
- govern structure, function, distribution
- precipitation, insolation, temperature
- insolation: most stable at equator, varies due to tilt
- ocean circulatory system: influence on temperature and atmospheric circulation
- tricellular model of atmospheric circulation: pressure belt differences, precipitation differences
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tricellular model of atmospheric circulation
- Hadley cell: by equator - low pressure, clouds and precipitation (tropical rainforest), air rises and comes down at 30deg. - high pressure, no clouds, low precipitation (desert) -- between them temperate deciduous forest
- Ferrel cell: 60deg. - low pressure, clouds, precipitation
- Polar cell: north pole - high pressure, no clouds, low precipitation (polar/tundra)
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productivity in biomes
desert < tundra < temperate grassland < taiga < savanna < temperate deciduous forest < tropical rainforest
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leaching
loss of water-soluble plant nutrients mostly by rainfall but also irrigation
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erosion
action of surface processes that removes soil, rock, dissolved material from one location on the Earth's crust and then transports it away to another location
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effects of climate change on biomes
- vegetation gradually moving towards poles and up mountain slopes
- vegetation gradually moving towards equator (unequal distribution of rainfall)
- low lying biomes might be completely lost
- consequences: expansion of areas with tropical disease vectors, loss of species diversity, migration, increased rates of primary productivity
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desertification
- as a result of biome shifting
- africa - sahel region
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zonation
- changes in community along environmental gradient
- due to changes in latitude, altitude, tidal level, distance from shore, coverage by water
- bands of vegetation
- spatial changes
- arrangement of pattern in communities in bands - response to change in environmental factor over a distance
- environmental gradient - cahnges over distance
- ex: sea on a rocky shore, mountains
- both local and global scale
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succession
- temporal changes
- process of change over time in ecosystem involving pioneer, intermediate, climax communities
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primary succession
- occurs on a previously uncolonized substrate
- rock - plant grows
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secondary succession
- occurs in places where a previous community has been destroyed
- faster - soil already formed, seed bank
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sere
change in communities from earliest community to final community
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seral stage
- series of transitory plant communities that develop during ecological succession
- from bare ground to climax community
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pioneer community
- first stage of ecological succession
- species able to live in difficult conditions
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intermediate community
several stages of succession between pioneer and climax communities
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climax community
- more or less stable community
- in stable-state equilibrium
- endpoint of ecological succession
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genetic equilibrium
- species and ecosystem diversity relatively stable
- gradual changes through natural succession
- large storages, complex food webs, npp balanced by rates of respiration, variety of nutrient and energy pathways contributes to stability
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types of succession
- depend on the type of environment occupied
- lithosere, hydrosere, xerosere
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lithosere
- on newly exposed rock surface
- left bare by glacial retreat/volcanic eruption
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hydrosere
- starts in fresh water
- wetland
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xerosere
- dry habitat
- limited by water accessibility
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primary succession phases
- colonization
- establishment
- competition
- stabilization
- complex community
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colonization
- soil: weathering rock, production of dead organic material
- plants: lichens
- animals: ants, mites, springtails
- little water, few organisms
- pioneer community - pioneer species: photosynthesis, effective absorption of water, growth reduces wind speed, increases temperature
- decomposition allows formation of simple soil for grasses
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establishment
- soil: further weathering, beginning of soil formation
- plants: annual plants and lichens, moss
- animals: ants, mites, springtails, spiders, nematodes, larval insects, ants, snails, termites
- pioneer community
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competition
- soil: further improvement
- plants: grasses and perennials, ferns
- animals: nematodes, larval insects, ants, snails, termites
- development of complex food webs
- pioneer community
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stabilization
- soil: deeper, more nutrient-rich
- plants: grasses, shrubs, shade-intolerant trees (pines)
- development of complex food webs
- intermediate species
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climax community
- shade-tolerant trees (oak, hickory)
- complex food webs
- last stage
- relatively stable, in equilibrium
- greater biomass
- higher species diversity
- favourable soil conditions
- better soil structure
- taller and longer-living plant species
- greater community complexity and stability
- greater habitat diversity
- steady-state equilibrium
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lichen
- symbiotic relationship between green algae and fungi
- mutualistic
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succession over time
- organic matter increase
- deeper soil - reduced soil erosion
- soil structure improves
- increase in mineral recycling
- grasses: attract more light, faster growth, roots trap soil
- dandelion: spread by wind, rapid growth
- these are intermediate species - better competition
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secondary succession
- a previous community has experienced disturbance
- faster than primary
- disturbance can be tipping point
- no colonization
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tipping point
minimum amount of change within a system that will destabilize it, causing it to reach a new equilibrium
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resilience
- social or ecological
- tendency of ecosystem to avoid tipping points
- contributed to by diversity, sizes of storages, variety of nutrient and energy pathways
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early vs late succession
- organic matter: storages bigger in late succession
- nutrients and minerals: increase in late succession
- nutrient cycles: cycles close towards late succession
- role of detritus: increase in role towards later succession
- depth of soil: increases in late succession
- size of organisms: larger in late succession
- diversity: more producers, more movement of biomass
- niches: realized niches in early succession are larger and wider
- stability: poor in early stages
- npp: high in early succession (less trophic levels, small respiratory losses), approaches 0 in late
- gpp: low in early succession (low density of producers), grows in time (increased consumer community, balanced by respiration)
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human impact on succession
- agriculture: livestock (feeds on saplings, trampling), crops prevent succession
- tourism: trampling
- slash and burn agriculture, burning of waste
- pollution
- introduction of non-native species
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plagiosere/plagioclimax
arrested stage of succession, often due to human activity
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productivity to respiration ratio
- P/R
- P=R - P/R=1: steady-state community
- P>R - P/R>1: biomass accumulation
- P<R - P/R<1: biomass depleting
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tundra
- mostly in north polar region (arctic tundra), also antarctica and alpic tundra
- limiting factors: sunlight (low light intensity - low rate of photosynthesis, low insolation, short daylength), temperature (low insolation = low temperature, enzyme-driven chemical reactions are slower due to cold (photosynthesis, respiration, decomposition), soil permanently frozen, limiting nutrients (slow recycling), peat bogs form - storage of carbon), water (locked up in ice, little rainfall)
- low productivity
- small plants, low shrubs and grasses - not enough soil
- root systems are spread out
- large animals with lots of fur
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tropical rainforest
- within tropics, close to equator (Amazon, South East Asia, Congo river)
- high and stable temperature (26deg)
- high species diversity
- sunlight and all year growing season
- soil is low in nutrients (rainfall - leaching)
- plants gain nutrients from detritus - decay causes growth
- shallow root systems
- canopy protects soil from rainfall
- varying levels of density
- high npp - 40% of world npp
- insects are majority of living animals
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temperate forest
- lower density than rainforest
- less availability for niches
- dominated by 1 plant species
- 90% of them have only up to 6 species of plants
- productivity lower than rainforest (variation of insolation, seasons)
- mild climate, lower average temperatures and less rain (500 to 1500 mm per year)
- winters are mild, summers are hot
- evergreen trees
- limitation in height for trees - max 13m
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desert
- 20% to 30% of land surface
- temperatures: day 45-49, night 0-10
- low precipitation - under 250 mm per year, unevenly distributed
- organisms: limited number, highly adapted, low productivity
- small vegetation
- ex: cacti (spikes not leaves, store water in stems, thick cuticula, deep and extensive roots)
- sand soils - porous
- animals: snakes (cold-blooded metabolism, conservation of water), mammals (underground during day)
- source of water for animals = plants
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grassland
- colder and warmer areas
- savanna
- one fifth of earth
- photosynthesise using less water than forests
- more diversity
- low productivity - less other organisms (animals) in the area
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tropical coral reef
- high biodiversity
- lot of sunlight, warm water
- near equator
- corals have calcium carbonate skeletons
- algae - symbiotic, live within polyps, photosynthesis - constant input of energy, many niches
- ex: great barrier reef
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hydrothermal vents
- in ocean
- on tectonic plate boundaries
- cracks - vents that spew nutrients in hot water
- extremophile animals (thermophiles)
- no sunlight - no photosynthetic organisms
- bacteria productivity supports diverse range of species (chemosynthetic bacteria)
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