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What are the four phases to the development of malignancy?
- 1. Transformation
- 2. Growth
- 3. Local invasion
- 4. Distant metastasis
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What three factors determine a tumors rate of growth?
- 1. Doubling time of the tumor cells.
- 2. Fraction of cells in cell cycle = growth fraction
- 3. Rate of loss of cells
- NOTE: Cell cycle is not shorter in neoplastic cells, just more cells in it.
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What are cancer stem cells and where have they been identified?
- Cells able to self-renew, seen in breast cancer and AML.
- Leukemic forms express the gene BMI1 --- represses cell cycle inhibitors: p161NK4a and p14ARF
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Name and describe three pathways of tumor spread.
- 1. Direct seeding of body cavity or surface - carcinomas
- 2. Lymphatics - carcinomas
- 3. Hematogenous - sarcomas, liver and lungs most frequently involved
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Name the four classes of normal regulatory genes.
- 1. growth promoting protooncogenes - dominant since only one needs to be damaged for transformation to occur
- 2. tumor suppressor genes - recessive since both alleles need to be hit
- 3. genes regulating apoptosis - can be dominant or recessive
- 4. DNA repair genes - usually recessive - both alleles need to be damaged
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Name 7 essential alterations for malignant transformation.
- 1. Self-sufficiency in growth signals (ie. don't need external signals for growth)
- 2. Insensitive to inhib signals
- 3. Evasion of apoptosis (often d/t inactivation of p53)
- 4. Defective DNA repair
- 5. limitless replicative potential (maintenance of telomere length and telomerase fxn)
- 6. Sustained angiogenesis - VEGF
- 7. Ability to invade and met
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Name the stages of the normal cell cycle.
G0 -- G1 -- S -- G2 --M
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What drives cells through the cell cycle?
- Cyclins and cyclin dependent kinases
- CDKs phosporylate proteins, exrpressed constitutively in an inactive form
- Cyclins synthesized during the cycle and rapidly decline after completion.
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List the sequence of events in the cell cycle.
- 1. Signal (ex. GFs, integrins)
- 2. MYC, RAS, other genes
- 3. Production of cyclin D -- activation of CDK4
- 4. RB phosphorylation within RB/E2F/DP1 complex (when RB is hypophos it forms a tight inactive complex with trans factor E2F and DP1)
- - RB/E2F/DP1 binds to promoter regions of E2F responsive genes needed for progression of cell cycle - RB recruits histone deacetylase - compacts chromatin
- - when RB is phos, it dissasociates and allows transscription of genes needed for progression ex. cyclin E, DNA polymerases, thymidine kinase etc.
- 5. Cyclin E then activates CDK2 and cell moves from G1 to S (G1-S transition is restriction point) and DNA synthesis occurs
- 6. E2F then mediates transcription of cyclin A which activates CDK2 - complex regulates prophase
- 7. Cyclin B-CDK1 then causes breakdown of nuclear envelope and intiates mitosis
- 8. Exit from mitosis - need inactivation of cyclin B/CDK1
- 9. Return to G1 or to G0
- So - D/4 then E/2 then A/2 then B/1
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Name the cell-cycle inhibitors.
- Cip.Kip: p21 (induced by p53), p27 (responds to TGFb)
- INK4/ARF: p16INK4a (binds D/4) promotes inh effects of RB, p14ARF (incr. p53 levels by inh MDM2)
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What are the two checkpoints of the cell cycle and how are they controlled?
- 1. G1/S - p53 - needed for p21 which inhibits cell cycle - slows or stops cycle if DNA damage
- 2. G2/M - mediated through p53 dependent and independent mechanisms
- NOTE: ATM senses DNA damage
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What are the 5 steps in cell proliferation?
- 1. GF binding
- 2. Activation of GF receptor - signal transduction
- 3. Signal transport via mesenger proteins to nucleus
- 4. Activation of nuclear regulatory factors -- DNA transcription
- 5. Entry to cell cycle --- cell division
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What is an oncogene?
Genes that support autonomous cell growth in cancer cells. Protooncogenes are their normal counterparts.
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Name the categories of oncogenes.
- 1. GFs
- 2. GF receptors
- 3. Signal transduction proteins
- 4. Nuclear regulatory proteins
- 5. Cell cycle regulators
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Give examples of protooncogenes encoding a GF.
- SIS - encodes b chain of PDGF, often same tumors express more of receptor as well - autocrine. But not enough for mal transformation but incr prol contributes to it.
- Id'ed in OSA and astrocytomas
- Also TGFa, HGF and Fibroblast GFs
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Give examples and the mechanism of oncogenesis of protooncogenes encoding GFRs.
- GFR are transmembrane proteins with GF binding site extracellular domain and intracellular domain with tyrosine kinase activity, when GF binds the receptor dimerizes and tyrosine phosporylation of signaling proteins.
- Oncogenic versions often have constituent dimerization and become activated without binding of GF
- Gives constant mitogenic signals to cell
- ex. ERB B1 (EGF receptor gene) overexpressed in SCC, ERB B2 in breast cancer, GIST overexpress c-KIT
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Name the most common protooncogene encoding signal transducing proteins and how it works.
- RAS - most common oncogene - mutations reduce GTPase activity of RAS proteins
- carcinomas - KRAS, bladder HRAS, hematopoeitic NRAS
- NORMAL RAS: Inactive RAS binds GDP, when activated exchanges for GTP, active RAS recruits RAF-1 and activates MAP kinase pathway which activates nuclear transcription and mitogenesis.
- Usually activation is transient d/t GTPases which return RAS to inactive state with GDP
- Cycling of RAS depends on: 1. nucleotide exchange - GDP to GTP by nucleotide releasing prot recruited by GFR and 2. GTP hydrolysis with GTPases
- GAPs - increase GTPase activity 1000 fold thereby preventing uncontrolled RAS activity
- Mutations in RAS prevent proper GAP activity and stops the GAP break
- RAS can also activate MAP kinase path and AP-1 transcription factor regulating cell cycle
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Give an example of a non-receptor tyrosine kinase oncogene.
c-ABL translocated from chromosome 9 to 22 where it fuses with BCR gene - fusion protein has potent tyrosine kinase activity - see in CML and some ALL
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What are transcription factors?
- Proteins that enter nucleus, bind DNA and activate or inhibit transcription of adjacent genes
- Ex of oncogenes: MYC, MYB, JUN, FOS
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What are the activities of MYC?
- MYC goes to nucleus, binds to DNA and activates transcription of: ornithine decarboxylase, cyclin D2,
- Also have range of other activities: histone acetylation, decr. cell adhesion, incr. cell mobility, incr. prot sythesis, decr proteinase activity
- Needs survival signals to not apoptose after prol though
- MYC mutations seen in burkitt lymphoma, and carcinomas - breast, colon, lung
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Give examples of protooncogenes encoding cyclins and CDKs.
- Cyclin D/ CDK4 common
- Cyclin D1 in mantle cell lymphoma
- CDK4 in glioblastoma and sarcomas
- Cyclin E in breast
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Name examples of tumor suppressor genes.
- 1. RB
- 2. p53
- 3. APC/b-catenin
- 4. Others: INK4a/ARF locus, TGFb, NF1, FN2, VHL, PTEN, WT-1, Cadheins, KLF6, PTCH
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List the key regulators in the cell cycle (ie. one of these needs to be abnormal in cancer).
1. RB, 2. p16INK4a 3. cyclin D, 4. CDK4
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Discuss the role of p53.
- p53 is DNA binding protein in nucleus, need mutation in both alleles to have effect
- p53 results in transcription of p21 which arrests G1 before S
- fxn is cell cycle arrest and initiation of apoptosis after DNA damage
- DNA dep kinases and ATM phosphorylate p53 which unfolds then becomes transcription factor and incr. p21
- Has short T1/2 and degraded with ubiquitin mediated proteolysis
- Also induces transcription of GADD45 - encodes protein for DNA repair
- If repair successful then p53 activates MDM2 which degrades p53
- If no repair then p53 activates BAX --- apoptosis (BAX binds to bcl-2 anti-apoptotic -- so initiates apoptosis)
- Summary: p53 phosphorylated by genes that sense DNA damage -- incr p21 (cell cycle arrest), GADD45 (DNA repair) --
- if no repair then BAX, if repair then MDM2 and p53 degraded
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What are the two homologues of p53?
P63 and p73
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Describe the APC/b-catenin pathway (WNT signalling pathway).
- b-catenin forms complex with TCF in nucleus (transcription factor) and results in upreg of cMyc, cyclin D1 - leading to prol
- APC binds b-catenin in cytoplasm and degrades it
- mutated b-catenin can occur which cannot be inh by APC
- ALSO b-catenin binds to E-cadherin - NB for adhesiveness, so mutations in b-catenin may result in less cell adhessiveness
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Discuss INK4a/ARF mutations.
- Melanomas, carcinomas
- lose capacity to block cyclin D/CDK4 so do not prev RB phosphorylation
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Discuss TGFb mutations.
- Colon and gastric cancers
- SMAD4 encodes component of TGFb -- mutated in pancreatic cancer, 2 mutated in colon cancer
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Discuss NF1 mutations.
NF1 regulates signal transduction via RAS - with mutations RAS trapped in active state
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Dicsuss NF2 mutations.
- Also called merlin, protein product is protein 4.1 in RBC cytoskeleton - bindins to actin and CD44
- mutations result in no cell-to-cell junctions and insensitivity to growth arrest signals
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Discuss VHL mutations.
Ubiquitin ligase, mutations prevent ubiquitination and degradation of HIF1 --- increased angiogenic GF (VEGF and PDGF)
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Discuss PTEN
Causes cell cycle arrest and apoptosis - by incr p27, loss of PTEN - prol
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Discuss Cadherins.
- cell to cell adherence, reduced in many cancers - local invasion and mets
- Can be 2ry decr d/t mutation in b-catenin (b-catenins bind to them and stabalize expression)
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Discuss KLF6
- Transcription protein - target genes: TGFb and TGFR
- Incr transcription of p21 independent of p53 so inh cell cycle
- mutation stop cell cycle block by p21
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Discuss PTCH
Receptor for hedghod proteins - regulates genes such as TGFb and PDGF-R
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List ways cancer cells evade apoptosis.
- 1. BCL-2 overexpression (anti-ap)
- 2. p53 mutations --- decr BAX and/or BIM transcription (both pro-ap)
- 3. MYC - prol. over expression along with incr. BCL-2 cooperate to give cancer
- 4. Incr survival signals - ex. PI3/AKT pathway - often incr. AKT in cancer d/t mutation
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Name the three types of DNA repair defects.
- 1. Mismatch repair - spell checker - without it errors slowly accumulate - microsatellite instability is hallmark
- 2. Nucleotide excision repair - uv light causes xlinking of pyrimidine residues - prevents DNA replication, NERs repair these
- 3. Recombination repair - ex. ATM mutation (ATM senses DNA double strand breaks and stops cell cycle via p53), BRCA-1 and 2
- in breast cancer - both involved in DNA repair and in G1/S checkpoint
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Explain how BRCA1 and 2 repair DNA.
- 1. DNA break sensed by ATM and CHEK 2 and phosphorylate BRCA1
- 2. BRCA1 migrates to the break site and complexes with Fanconi anemia protein D2
- 3. BRCA2 then migrates to the break site with RAD51 and together they repair the break
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How does neovascularization aid in tumor growth?
- 1. Supplies nutrients and oxygen
- 2. New endothelium produces GF (IGF, PDGF) which are also needed for tumor met
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Why are tumor vessels leakier?
Increased VEGF
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What are the two most NB tumor-associated angiogenic factors?
- 1. VEGF and 2. bFGF
- What effect does p53 have on tumor angiogenesis?
- Increase transcription of anti-angiogenic thrombospondin 1 and downreg of VEGF and HIF-1 (incr. VEGF prod)
- So no p53 --- no thrombospondin --- increased VEGF
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Name angiogenesis inhibitors.
Thrombospondin, p53, angiostatin, endostatin, tumstatin - latter three produced by cleavage of plasminogen and collagens
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List and describe the steps of ECM invasion by tumor.
- 1. Detachment - loss of e-cad, sometimes d/t mutant b-catenin
- 2. Attachment to matrix proteins - receptor mediated attachement to laminin and fibronectin, normal epis have high affinity
- receptors on basal surface, carcinomal cells have more and all over -- more receptors, more invasive tumor
- tumor cells also express integrins which are receptors for ECM components
- 3. Degredation of ECM - proteolytic enzymes or induce host cells to make them, serine proteases, cystein proteases, MMP
- MMP2 and 9 cleave type IV collagen in BM and mobilizes VEGF in BM - have angiogenic effects d/t proteins uncovered but
- also antiangiogenic d/t collagen breakdown results in endostatin and tumstatin
- 4. Migration of tumor cells
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What is the role of CD44 in metastasis?
CD44 expressed by T cells to home to high end venules, some tumor cells can express and home
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How does the stromal microenvironment affect carcinogenesis?
- 1. Cleavage of collagen IV releases VEGF and degredation of laminin-5 results in a fragment that incr. motility
- 2. ECM stores growth factors in inactive forms: PDGF, TGFb, bFGF - paracrine effect
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What chromosomal abnormalities are related to carcinogensis?
- 1. Translocations (common) - can results in overexp of protooncogenes d/t removal from reg elements
- ex. MYC gene translocated in burkitt lymphoma, removed from its regulatory sequences and get MYC overexpression
- similarly cyclin D overexpression in mantle cell lymphoma, activation of BCL2 (anti-ap) gene in fol lymphomas
- or can get recombination with new adjacent genes - growth promoting chimeric protein
- ex. phil chrom - fusion of BCR-ABL - hybrid protein which has tyrosine kinase - results in decr. apop, decr GF requirement,
- decr. cell adhesion, activates many pathways - PI3 kinase, RAS, STATs
- 2. Inversions
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What is the effect of gene amplication?
- Activation of protooncogenes - may see several hundred copies, microscopically can see dms or HSRs
- ex. amplification of N-MYC in neuroblastoma, ERB-B2 in breast cancer, cyclin D in others
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What epigentic changes can result in cancer?
- Can see hypermethylation of pormoter sequences without damage to DNA sequence, can inactivate tumor suppressor genes
- Methylation takes place on CpG islands in DNA
- Have seen this in P14ARF, p16INK4a, BRCA-1, VHL and MLH1 (mismatch repair gene)
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NOTE: most cancer involve mutations of several oncogenes and loss of two or more tumor suppressors
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What is the difference between gatekeeper and caretaker genes?
- Gatekeepers - ongogenes and tumor sup genes that control tumor growth
- Caretakers - do not directly control tumor growth but affect genomic stability
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For sporadic cancers what two pathways are usually disrupted?
- 1. RB - INK4, Cyclin D, assoc kinases, RB
- 2. p53 - p14ARF, MDM2, p53
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List the steps involved in chemical carcinogenesis.
- 1. iniation - permanent DNA damage - but carcinogen induced DNA damage does not always lead to initiation since can be repaired
- 2. Promoter - can induce tumor in initiated cells but not normal cells, do not affect DNA directly, reversible
- application of a promoter lead to prol and clonal exp of initiated (mutated) cells
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List the major carcinogens.
- 1. Direct acting:
- Alkylating agents
- Acylating agents
- 2. Pro-carcinogens - need metabolic activation
- Polycyclic heterocyclic aromatic hydrocarbons
- Aromatic amines, amides, azo dyes
- Natural plant and microbial prodcuts - aflatoxin, griseofulvin, cycasin, etc.
- Others: nitrsamine, amides, vinyl chloride, chrominum, fungiides etc.
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List some promoters of chemical carcinogens.
cigarette smoke, alcohol, viruses, hormones, bile salts
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What are most commonly mutated with UV radiation?
p53 and RAS - get formation of pyrimidine dimers in DNA - usually repaired by NER pathway:
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Name the steps of the NER pathway.
- 1. recognition of DNA lesion
- 2. Incision of strand on both sides
- 3. Removal of damaged region
- 4. synthesis of patch
- 5. ligation
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Name some DNA viruses which are carcinogenic.
Adenovirues, fibroma in rabbits, BPV
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Name some RNA viruses which are carcinogenic.
FeLV, FIV, EIA, Papillomavirus
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Explain carcinogenesis of papillomavirus.
- viral DNA inserts, results in E6/E7 overexpression - overcome cell cycle inh.
- often see p53 mutations
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Explain carcinogenesis of Helicobacter pylori.
Dz strains have CagA (pathogenicity island) - CagA injected into host cells, also VacA (other virulence gene)
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List some tumor antigens:
- 1. Products of mutated oncogenes/tumor suppressor genes
- 2. Products of other mutated genes
- 3. Overexpressed proteins - may normally be in such small amts that there is no self-tolerance
- 4. virus products
- 5. oncofetal proteins - expressed on fetal tissues and by cancer cells but not adult cells
- ex. AFP, CEA
- 6. Altered cell surface glycolipids/proteins
- 7. CD antigens
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List the cells involved in tumor immunity.
CD8 Tcells, NK, Macs - NK and T cells produce IFNg which activate macs - ROS killing etc.
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List ways tumor cells evade the immune system.
- 1. Selection of antigen-negative variants (survival of the fittest)
- 2. Loss or reduced MHC1 escape CTL
- 3. Lack of costim
- 4. Immunosuppression - ex. secrete TGFb
- 5. Antigen masking - ex. by glycocalyx molecules
- 6. Apoptosis of CTL - express FasL
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What cytokines are responsible for cancer cachexia?
- TNF, IL1, IFNg
- Also proteolyis-inducing factor - increases catabolism of fat and mm (not cytokine)
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