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a growth of microorganisms on or in a nutritive medium.
culture
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containing only one species of organism
pure culture
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visible growth as seen on a solid medium
colony
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study of the form and structure of living organisms; shape
morphology
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microscopic shape
cellular morphology
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macroscopic or visual form and structure on a given medium or substrate.
colonial morphology
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having complicated nutritional requirements
fastidious
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living in the presence of oxygen
aerobic
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living in the absence of oxygen.
anaerobic
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essential; able to survive in only one environment
obligate/strict
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not required, optional; capable of adaptive response to varying environment.
facultative
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bacteria normally residing in a specific part body area.
normal flora/colonizers
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the ability to produce disease.
pathogenicity
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degree of pathogenicity.
virulence
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within the living body
in-vivo
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within a glass; in an artificial envrionment.
in-vitro
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area of biologic science comprising three distinct, but highly interrelated, disciplines that include classification, nomenclature, and identification
taxonomy
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persistent survival of microorganisms
colonization
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-
-
-
-
enterobacteriaceae
families
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in the bacteria Salmonella typhi what is the genus and what is the species?
- genus: salmonella
- species: typhi
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robert koch proved this while studying anthrax bacillus in germany in the late 1800's
germ theory
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a specific disease is caused by a specific microorganism is the principle of what?
Germ theory
-
what are the four postulates of the germ theory?
- a specific organism can always be found in association with a given disease
- the organism can be isolated and grown in pure culture in the lab
- the pure culture will produce the disease when inoculated into a susceptible animal
- it is possible to recover the organism in pure culture from the experimentally infected animal
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this hood allows room air to pass through cabinet, sterilzing only the air exhausted.
Class I
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in this hood 70% or air is re-circulated.
class IIA
-
in this hood air is exhausted outside the hood.
Class IIB
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This hood is fully enclosed.
Class III
-
what does BSL stand for?
Biological Safety Levels
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This is the BSL for organisms with no know potential for infecting healthy people
BSL 1
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this BSL contains all common agents of infectious disease.
BSL 2
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This is the BSL for organisms unlikely to be encountered in routine laboratory. Transmitted primarily by aerosol.
BSL 3
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This is the BSL for viruses not commonly found in the US
BSL 4
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what is another term for the cell wall?
peptidoglycan murein layer
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This gives the cell shape and strength, it changes with osmotic pressure.
cell wall
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this is composed of primarily peptidoglycan teichoic acid.
Gram Positive cell wall
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This cell wall is thicker, more resistant to physical disruption, more susceptible to PCN and stains purple or blue.
gram positve cell wall
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the outer layer of this is composed mostly of lipids, lipopolysaccharide, with a thin peptidoglycan.
Gram negative cell wall
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this is a toxic endotoxin that servers as a barrier against harmful chemicals and enzymes in Gram negative cell walls.
lipoplysaccharide
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These have a thinner wall that is less resistant to physical disruption, less inhibiton to basic dyes, and less susceptible to PCN. Stains red or pink.
Gram negative cell wall
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this provides protection from phagocytosis, drying and gives the bacteria increased virulence.
capsule
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capsules are _____ labile
heat
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what are the two stains used for capsules?
-
what are the two types of negative stain?
-
what is the appearance of capsules in negative stain?
- capsule is clear
- background is black
-
what is the appearance of a capsule in hiss stain?
- capsule is light blue
- background is deep blue
-
what is the function of flagellum?
locomotion or motility
-
these are extremely fine, hairlike appendages
flagellum
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falgellum are ______ and ____ labile.
-
what is the composition of flagellum?
protein
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what is the staining method for Flagellum?
Ryu
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what is the appearance of flagellum in the ryu staining method?
organism and flagella are coated red
-
what type of microscopy is used to see unstained flagella?
electron microscopy
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what are three methods of demonstrating motility in bacteria?
- wet prep
- hanging drop technique
- stab culture of semi-solid media
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what are the three types of flagellum?
- atrichous
- polar
- peritrichous
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this means without flagellum.
atrichous
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what are the three types of polar flagellum?
- monotrichous
- lophotrichous
- amphitrichous
-
this polar flagellum is a single flagellum at only one end of the cell
monotrichous
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this is when two or more polar flagella are at one end of the cell wall
lophotrichous
-
this is when one or more flagella are at both ends of the cell wall
amphitrichous
-
this means without flagella
atrichous
-
this is when flagella surround the entire cell
peritrichous
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this is the most common type of flagella among most medically important bacteria
peritrichous
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these are hair like structures of gram negative cells that are 1 to 2 um long.
pili
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what is another name for pili?
fimbriae
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what are the two functions of pili?
-
entry for genetic material during bacterial mating.
conjugation
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pili cannot be stained and must be observed through what type of microscopy
electron microscopy
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this is a semipermiable membrane which is the site of cellular respiration.
cytoplasmic membrane
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this cellular component secretes extracellular enzymes and controls passage of nutrients and waste
cytoplasmic membrane
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this cellular component is involved in invagination of cytoplasmic membrane.
mesosome
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this increases the available membrane surface area for catabolic and anabolic cellualr enzymes.
mesosome
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this is a densely packed structure made of RNA and protein involved in protein synthesis.
Cytosol inclusions
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this is a stored form of glucose.
glycogen
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Bacterial nuclear material consists of ________ chromosome(s).
single
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Endospores are produced by certain ____ in response to adverse conditions.
GPB
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what are endospores composed of?
-
what is the stain used to dye endospores?
malachite green spore stain
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when using malachite green spore stain what is the appearance of the endospores?
- spore: green
- sporangium: red
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this is a substance produced by organism that speeds up rate or reaction without being altered or used up.
enzyme
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what are the two types of enzymes?
- extracellular
- intracellular
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these are enzymes which enhance pathogenicity. they are excreted by the cell into surrounding environment
Extracellular (exoenzyme)
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these are enzymes that are maintained within the cell which produce energy.
intracellular (endoenzyme)
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these are toxins which are secreted into the environment by GP organisms.
Exotoxins
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wqhat are two organisms which secrete exotoxins.
-
exotoxins are _____ and ______ labile.
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These exotoxins are used as a vaccine and stimulate antbody production.
toxoid
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these toxins are contained within cell wall of many gram negative bacteria.
endotoxin
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this type of toxin is composed of lipopolysaccharides.
endotoxin
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what are two pharmocologic effects of endotoxins?
- pyrogenic effects
- blood changes
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this is essential to all bacteria and allows nutrients to enter cell, it also provides suitable environment for metabolic reations ande protects cell from sudden temperature changes.
moisture
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this allows for the fastest growth rate in the shortest amount of time.
Optimum growth temperature
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this is when bacteria thrive in an environment with a high CO2 content.
capnophilic
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this is when bacteria thrives in an environment with small amounts of oxygen and carbon dioxide.
microaerophilic
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this is when bacteria thrive in an environment with high moisture levels
humidophilic
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what are the three nutritional requirements for bacteria?
-
what is the means by which cellular multiplication takes place in bacteria?
transverse binary fission
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in this phase of the growth curve there is no growth, high nutrition and low toxic waste
lag
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in this phase of the growth curve there is increasing growth rate.
acceleration
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in this phase of the growth curve there is constant growth, decreasing nutrients, and increasing toxic levels.
exponential (log)
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this the phase of the growth curve where toxic metabolites accumulate and growth is inhibited.
retardation
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this is the phase of the growth curve where nutirents are exhausted and toxic waste is high.
maximum stationary
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in this phase of the growth curve, the majority of cells die.
decline (death)
-
what phase of the growth curve should work with bacteria be done?
exceptional
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this is a culture of bacteria derived from another culture.
subculture
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physiological groups of bacteria are based on what?
temperature requirements
-
these cold loving bacteria grow between 0-30oC
psychrophiles
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what is the optimum temperature for psychrophiles?
20oC
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what is an example of a psychrophile?
francisella tularensis
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most medically important pathogens fall into this pysiological group with a growth range of 20-40oC.
mesophiles
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what is the optimum temperature for mesophiles?
37oC
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these are heat loving bacteria with a growth range of 45-60oC
Thermophiles
-
what is the optimum temperature for thermophiles?
50oC
-
this bacteria is a thermophile with a growth range of 65-75oC
bacillus stearothermophilus
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these are thermophiles which also grow in the mesophilic range.
Facultative thermophiles
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this group of bacteria require oxygen in very reduced amounts (5-15%).
microaerophilic
-
this group of bacteria require energy from light.
phototroph
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this group of bacteria require energy from chemical compounds.
chemotroph
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this is a self sustaining bacteria group.
autotroph
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this is not a self sustaining bacteria group
heterotroph
-
this group of bacteria uses chemical and organic compunds as a crabon source. includes all medically important pathogens
chemoheterotrophs
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what is the name of the bacteriologist who developed the Gram Stain?
Christian Gram
-
procaryotes will differentially retain crystal violet depending on ____________.
cell wall characteristics
-
what is the primary stain used in Gram stain?
crystal violet
-
what is the mordant used in gram stain?
gram's iodine
-
what is the decolorizer used in gram stain?
ethanol/acetone
-
what is the ethanol/acetone ratio for decolorizer
1:2
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what is the counter stain used in gram stain?
safranin-O
-
this stain is used to observe the presence of encapsulated budding yeast forms.
negative stain
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When preparing a smear for gram stain what should the appearance be?
homogenous, thin, not opaque
-
how long is decolorizer solution applied to the slide for?
3-5 seconds
-
what objective should be used when examining a gram stain slide?
100x
-
what bacteria stain red or pink with gram stain?
gram negative
-
what bacteria stain purple or blue/black with gram stain?
gram positive
-
what three things are observed when performing a clinical material evaluation of bacterial cells?
- gram reactions
- morphologies
- arrangements
-
this provides a preliminary diagnosis when reporting results?
clinical material evaluation
-
how are PMN and epithelial cells reported?
semi-quantitive micro
-
when using this type of stain, the specimen is centrifuged and slide is read under 40x.
negative stain
-
what is considered positive when using negative stain?
presence of microbial capsules
-
what is used as quality control for gram positive organisms?
staphylococcus aureus
-
what is used as quality control for gram negative organisms?
escherichia coli
-
what is used as positive quality control for negative stain?
candida albicans
-
what is used as negative quality control for negative stain?
normal saline
-
colonial morphology aids in ___________.
identification
-
when is colonia morphology interpreted?
after 24 hours
-
colonial morphology is a __________ description that requires skill.
subjective
-
punctuate or pinpoint colonial morphology
0.5mm
-
minute colonial morphology
0.5-1.0mm
-
small, med, large colonial morphology
1.0-5.0mm
-
spreading colonial morphology
5.0-10.0mm
-
actively motile colonial morphology
swarming
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what are five types of elevation in colonial morphology
- flat
- raised
- convex
- umbilicate
- umbonate
-
what are five forms or shapes in colonial morphology
- punctiform
- circular
- filamentous
- irregular
-
this descirbes a butter-like texture or consistency in colonial morphology
butyraceous
-
this describes a sticky or glistening texture or consistency in colonial morphology
mucoid
-
in colonial morphology ____ is usually non-definitive and extremely subjective.
odor
-
when performing bacterial classification what objective do you scan?
10x
-
when performing bacterial classification what objective do you scrutinize at?
100x
-
what is the average diameter of cocci?
1um
-
these are round or spherical shaped bacteria
cocci
-
this is bacteria in pairs
diplococci
-
this is bacteria in a tetrad or cluster of four
tetracocci
-
this is bacteria is a cuboidal or packet of eight
sarcinae
-
this is cocci in chains
streptococci
-
this is cocci in clusters
staphylococci
-
these are rod shaped bacteria
bacilli
-
these are chains of rods
streptobacilli
-
these are pairs of rods
diplobacilli
-
these are rods which are parallel and acute angles to each other
palisades
-
these are rods that are parallel to each other
school of fish
-
these are oval bacterial cells that are intermediate between the coccus and bacillus forms.
coccobacilli
-
this is the occurence of two or more structural forms during a life cycle.
pleomorphism
-
these are spiral or helical shaped bacterium
spirilli
-
the process whereby all forms of microbial life, including bacterial spores, are killed.
sterilization
-
what are the two means by which sterilization takes place
-
this is the complete elimination of microbial viability.
sterilization
-
this is the temporary state of asepsis or free from microorganisms.
sterility
-
the irreversible loss of the ability to reproduce.
death
-
what is the method of sterilization for infectious waste
incineration
-
what is the most common method of sterilization in microbiology.
moist heat (steam under pressure)
-
what is the method used to sterilize things using moist heat.
121oC for 15 min at 15PSI
-
this method of sterilization is used for heat sensitive items using ionizing (gamma) radiation.
filtration
-
this is the shortest period of time to kill by heat.
thermal death time
-
this denatures proteins and destroys enzymes
heat
-
this is the most common type of chemical sterilization
ethylene oxide (EtO
-
what are the three types of chemical sterilization
- ethylene oxide
- gluteraldehyde
- peracetic acid
-
this chemical sterilization method is used for sporicidal
gluteraldehyde
-
this method of sterilization exerts simply an inhibitory effect on bacterial growth
cold
-
this is the process whereby pathogenic organisms but not necessarily all microorganisms or spores are destroyed.
disinfection
-
what are the three methods of disinfection
- boiling
- pasteurizing
- nonionizing radiation
-
how do you boil for disinfection
100oC for 15 min
-
how do you pasteurize for disinfection
- 63oC for 30 min
- 72oC for 15 sec
-
how often do you record temps for sterilization equipment?
daily
-
how often are sterility checks performed on sterilization equipment
weekly
-
there are autoclave ampules that are impregnated with bacillus stearothermophilus
Kilit Ampules "A" test
-
what are the positive and negative results for Killit ampules
- positive: yellow
- negative: no color change or purple
-
these are autoclave strips placed in thio broth impregnated with bacillus stearothermophilus.
spore strips
-
what are the positive and negative results for spore strips
- positive: turbidity or growth
- negative: absence of turbidity or growth
-
this is used for flame sterilization
bunsen burner
-
what temperature does the incinerator operate at?
1500oF (815oC)
-
what is the rule for using an electric incinerator
5 second rule
-
what material is the metal inoculating loop made out of?
3 inches of tungsten alloy or nichrome V
-
what is the purpose of an inoculating loop?
streaking
-
what is the purpose of an inoculating needle
to inoculate tubed media
-
what is the purpose of a calibrated loop?
colony count
-
what two materials are calibrated loops made out of?
-
what quantity of fluid does a calibrated loop deliver?
.001ml
-
what is are the proportions of a petri dish?
-
this is a polycarbonate jar with a O-ring gasket lid that clamps with a screw.
Gaspak jar
-
Calibrated loops should be calibrated ti within ___.
10%
-
culturette swabs are aslo known as what?
-
what is the media used for a pharynx collection?
culturette swab
-
which specimen do you gram stain first?
sputum
-
which specimen should be collected then transported to the lab within two hours?
urine
-
how far past the sphincter is a stool swab collected?
2.5 cm
-
how far into the urethra should a genital collection penetrate?
2-4 cm
-
what are the quantities of O2 and CO2 in a candle jar?
-
how much CO2 is used in an anaerobic system?
5-10% CO2
-
how much CO2 is used in the CO2 system?
5-10% CO2
-
how much CO2 and O2 is used in the microaerophilic system?
-
when performing a semi-quant count, how is quandrant isolation performed on a petri dish?
- extent of growth Enumerationprimary quadrant 1+
- second quadrant 2+
- thrid quadrant 3+
- fourth quadrant 4+
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