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3 evidence of natural selection in darwins finches
- antibiotic/pesticide resistance
- industrial melanism
- changes in sparrow body size
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3 types of benefits of intersexual selection
- direct
- indirect
- no benefits
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intersexual selection benefits 3
- the males have evolved because they provide a direct material benefit to the female
- male provides genetic benefits to the offspring
- built is preference for a certain male, no indication of male quality
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females judge the benefits a male can provide when choosing a mate
direct benefit
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6 types of direct benefits model
- good nesting territory
- direct protection from predators
- nuptual gifts
- lower predation risk
- lower parasitism
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provide food and gifts to females
nuptual gifts
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lower predation risk explained
females prefer bright colored males b/c they are easier to find and the females have a lower risk of being attacked by a predator while looking for a mate. they dont want to have to look far.
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lower parasitism explained
females pick males w/ bright colors or who sing high and well to show they arent sick so the female knows by mating with the male they wont get sick either
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fishcers runaway sexual selection 2
*needs to be true*
- viability selection on some phenotype
- genetically based female preference for relative values of that pheno
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indirect benefits models
(good genes)
females pick males based on pheno that shows they have good quality genes
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handicap principle
females choose males that have a pheno that is so extreme that its a handicap to their survival
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3 factors to the handicap principle
- females choose a male who is detrimental to their fitness
- need high genetic quality in order to survive their handicap
- pass on good genes to both sexes but the handicap goes to the males
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parasite load model 2
- females choose males w/ extra traits so it shows he has no parasites
- parasitic resistance genes to offspring
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co-evolution
one species evolution causes the evolution in another species
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co-evolution example
an animal who use to be caught by predators is no able to outrun them. The predator evolves and increases its speed to catch the prey that has increased itself
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co-speciation
speciation of one species causes the speciation in another species
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how can co-speciation occur between species
there needs to be a relationship between taxa
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how can you find out speciation of one taxa causes speciation of another
- compare phylogeny of species
- *will not always be a 1-1 thing*
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symbiosis
both of the taxa is working together (or living together) that is beneficial to both
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example of obligate symbiosis
endosymbiotic theory
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evidence for endosymbotic theory 2
- structures in cell look like bacteria
- gene in mito and chloro is closer to bacteria than eukaryotes according to phylogeny
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character displacement
when species that are sympatric evolve differences b/c of the competition between one another
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how to recognize CD
by looking for sympatric species
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sympatric
2 species live together but look different in pheno
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allopatric
2 species in different places look similar
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altruism
an organisms pheno is detrimental to itself but beneficial to others
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3 forms of altruism
- not really altruism
- reciprocal altriusm
- kin selection
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reciprocal altruism
situation in which it really is altruism but the same individual is likely to be the recipient of altruism at a later time
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in reciprocal altruism the cost of altruism is low but the benefit of receiving it is high
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kin selection
you can spread your genes by either reproducing yourself or helping others who have similar genes reproduce
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inclusive fitness
fitness of an organism takes into account its direct reproduction and the reproduction of its relatives
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Wi=
inclusive fitness of i
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b ij=
indirect effect of i on j
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r ij=
coefficient of relationship of i and j
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Must help more relatives than non relatives in 2 ways
- kin recognition
- help kin w/o recognizing it
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allopolyploidy
when diff species hybridize to create polyploid
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resultant species has X from the parent species and is easy to identify
allopolyploidy
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autopolyploidy
when a single species undergoes polyploidization
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galeopsis tetrahit was a polyploid mint species
an artifical plant s created by hybridizing G. pubescens and G. speciosa
the hybrid was identical to the wild type found in nature and was able to breed with each other
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a lot of polyploid species are triploid or other odd ploidy levels
this reduces fertility in sexual crosses
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gynogenesis
egg development activated by a spermatozoon but the male gamete contributes no genetic material
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parthenogenesis
when females reproduce without the involvement of males or sperm
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eusociality
individuals that have given up reproduction to help others reproduce
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group selection
individual selection except the individual is actually a group
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2 geographical models of speciation
- allopatric speciation
- sympatric speciation
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allopatric speciation
speciation in which a single lineage has split into diff geographical areas and those populations may evolve to become species
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2 forms of allopatric speciation
- macrovariant (dumbell) speciation
- peripatric speciation
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macrovariant speciation
speciation occurs when a single lineage splits into 2 or more subsets that involve changes to become diff species
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peripatric speciation (Mayr)
speciation occurs in peripheral isolates around the species
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punctuated equillibrium (gould and aldridge)
everything eventually changes either rapid or slow and all the changes that occur during evolution is due to speciation
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2 forms of sympatric speciation
- instantaneous sympatric speciation
- gradual sympatric speciation
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sympatric speciation
new species arises in the same place of the old species
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instantaneous sympatric speciation
some change happening causes a reproductive isolation between those who havent changed and those who have
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gradual sympatric speciation
speciation that takes many generations to evolve overtime
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2 things needed in order to have gradual speciation
- need to have assortive mating
- disruptive selection so species will have selection to choose a mate w/ those who look like it
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species concept
attempt to define which biological discontinuities are species vs higher order taxa
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what are species and higher order taxa
groups that share a common ancestors
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only species have cohesion mechanisms
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cohesion mechanisms
evolutionary forces that make members of a species more similar to each other than to members of other species
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biological species concept
(mayr)
species are a group of actually or potentially interbreeding populations that are reproductively isolated from other such groups
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mayr belived gene flow is
cohesion mechanism
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gene flow at one time wasn't taken into consideration therefore studies of species focused on mechanisms preventing interspecific gene flow
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2 forms of reproductive isolating mechanisms
- premating isolation barriers
- postmating isolation barriers
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premating isolation barriers
postmating isolation barriers
- sae your gametes
- waste your gametes
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2 types of isolation in premating isolation barriers
- ecological isolation
- mechanical isolation
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3 ways ecological isolation can occur
- habitat (silty vs clearwater)
- breeding time (fall vs spring)
- pollinator (humming bird vs bee)
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mechanical isolation example
beetles when they try to mate end up breaking off their penis in the beetle.
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2 postmating isolating barriers
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2 parts to postzygotic postmating isolating barriers
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prezygotic postmating isolating barriers subtopic
gametic incompatibility
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postzygotic postingmating isolating barriers- extrinsic
examples 2
- ecological inviability
- behavorial inviability
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postzygotic postmating isolating barriers-intrinsic
examples 3
- hybrid inviability
- hybrid sterility (ligers, mules, etc.)
- hybrid breakdown
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evolutionary species concept
cohesion mechanism is gene flow over time
a species is a single independent lineage
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wrecognition species concept
cohesion mech is gene flow
a species is the most inclusive pop of sexually repro individuals that share a common fertilization system
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fertilization system of recognition species concept
species specific mate recognition system SMRS
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how is recognition species diff from biological
- BSC focused on the wrong thing
- should be called isolation species concept
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ecological species concept
NS is its cohesion mechanism
a species is a lineage that occupies an adaptive zone minimally diff from that of any other lineage in its range and which evolves indepedently of lineages outside its range
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why is ecological species concept a concept 3
- lots of lineage with gene flow were diff
- lots of lineage with no gene flow often stayed the same
- must be selection that maintains cohesion
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phylogenetics species concept 4
cohesion through GF
- a species is:
- -smallest diagnosable group
- -smallest monophyletic group
- -smallest group with total gene coalescence
- focused on identifying criteria rather than actual properties
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phylogenetic species concept is crappy because unique characters do not mean independence
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cohesion species concept
cohesion mech is GF and/or NS and/or GD
a species is the most inclusive pop with intrinsic cohesion
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2 catergories of grgenetic mechanism of speciation
- gradual mechanism
- genetic revolutions
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gradual mechanism
selection of drift causing evolutionary change to get speciation
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Dobzhansky and muller model for gradual mechanism states
it takes a minimum of 2 mutations in order for speciation to occur
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genetic revolutions
need to have a dramatic change in the gene pool in order to get speciation
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founder effect speciation
small subset of the species break off and evolves into another species
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3 types of genetic revolutions
- peripatric speciation
- founder flush speciation
- genetic transilience
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3 models that have founder effect that can lead to speciation
- increased inbreeding in the founder pop
- need to have alleles that do good as homo
- mate choice inbreeding causes allele freq to stay the same
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Mayr belived in peripatric speciation
all speciation occured by increasing inbreeding in the founder group
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founder flush speciation
two species that are closely related are found on different islands
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founder flush reimpposes selection
selecting for a combo of genes so it will create a new species
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genetic transilience
allele freq changes caused by FE causes selection to favor eff alleles that are diff from their ancestors
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speciation is a gradual buildup of differences
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cohesion species concept
A species is the most inclusive population with intrinsic cohesion
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2 types of prey
- conspecific
- heterospecific
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2 molecular techniques
- polymorphism
- molecular clock
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neutral theory
molecular polymorphism found in a population at any given time consists mostly of alleles with equivalent effects on fitness
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most biologists believe 2
- most variation is neutral
- occasional selection resets the pop
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3 ways to use molecular info
- estimate phylogenies
- estimate time to common ancestor of diff taxa
- effective pop size
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direct benefits
models that say the characters of the males have evolved because they provide a direct material benefit to the female
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indirect benefits
males provide genetic benefits to the offspring
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judge characteristics that is behavior or monophylogeny of the male
indirect benefits
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no benefits
- built in preference for a certain male, no indication of male quality
- no reason why they like it, they just do
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altruism will spread if you help relatives preferably
you must help more relatives than nonrelatives
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haplodiploidy
males develop from unfertilized eggs and are haploid, and females develop from fertilized eggs and are diploid
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workers of haplodiploidy share half of their genes and can share their genes faster by helping the queen to make more worker bees
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female workers of haplodiploidy have the potential to be fertile but give it up to help the queen produce
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wade argued that group selection can occur if done the right way. Group selection can occur if you find a model that has individual and group selection
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mayr stated that macrovariant cannot happen
why 2?
- you cant split up a species and still assume them to be the same species
- you have to do something radical to the gene pool to cause the split
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males cantbe asexual because sperm cant reproduce on its own
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asexual females can mate with each other, one can turn into a male while the other stays a female.it is said they reproduce better but no sex occurs
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species need to live with each other b/c it needs male sperm for its species
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in general alleles are formed and disappear so quickly that only a few will become fixed
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neutral theory only explains at a molecular level
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molecular clock
amount of time between a common ancestor and the differences between them
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molecular clock numbers meaning
the number of differences between the species since being from a common ancestor
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synonymous 2
- only apply to codon protein genes
- changes the code but not the amino acid
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non synonymous 2
- mutation in DNA that changes the AA
- causes you to have differences between lineages
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how is nonsynonymous support for the neutral theory
it is more likel;y to be effected by selection when comparing to synonymous
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this works well if GF barrier
TMRCA
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TMRCA is done when lineage are seperate from each other
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TMRCA example would be panama shrimp
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ploidy
set # of X in the genome
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to get substitution rate you have to estimate from fossil record
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