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Processing
- the catabolism of protein into peptides inside a host cell
- some peptides will go on to bind to MHC molecule
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Presentation
- a peptide & MHC are presented on the surface of a host cell
- will go on to be recognized by a TCR on either a CD4+ or CD8+ T cell
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exogenous antigens
- pathogens are taken up by specialized host cells, APCs, and are not pathogenic but still foreign
- “harmless” antigens
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endogenous antigens
derived from inside a host cell as a result/product of the cell being infected by a foreign pathogen
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exogenous antigen processing
- occurs using MHC class II pathway (eg. dendritic cells, macrophages)
- 1. antigen is taken into acid vesicles & broken down into peptides
- 2. vesicles containing broken down peptides merge with vesicles containing newly synthesized MHC class II molecules
- 3. peptide-MHC class II is presented on the surface of the cell to CD4+ T cells
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endogenous antigen processing
- occurs using MHC class I pathway
- 1. antigen catabolized (degraded) in cytoplasm by proteasome
- 2. peptides transported to ER
- 3. peptides associate & selectively bind to newly made MHC class I molecules (still happening in the ER)
- 4. peptide-MHC class I complex moves from the ER to the golgi & is presented on the surface of the cell for interaction w/ CD8+ T cells
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What size peptide can bind to an MHC class I complex?
- peptides must be 8-9 amino acids long
- this length fits into the peptide-binding groove of the MHC class I molecule
- there are fewer peptide size restraints in respect to MHC class II molecules (can have 12-20 AA long peptides binding)
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What effect does Interferon gamma (IFNγ) have on antigen processing pathways?
- it can up-regulate both MHC class I & II processing
- in contrast, viruses/tumors can down-regulate processing, especially endogenous in MHC class I presenting cells
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What happens when an antigen peptide does not bind to an MHC molecule?
it does NOT trigger an immune response
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cross-presentation
mechanism by which dendritic cells can showcase peptides derived from exogenous antigen processing & present them to CD8+ T cells
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What does the selectivity of peptide binding to certain HLA molecules and huge diversity of HLA molecules help to explain?
- upside: the combination of HLA & peptides invoke a protective response in response to certain diseases (eg. malaria)
- downside: the large diversity sometimes confers pathology in those particular individuals who have HLAs that are anti to self peptides
- there's an evolutionary advantage
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What is required but not sufficient for an APC to activate a CD4+ T cell?
- MHC class II presenting a peptide expressed on the APC surface
- TWO SIGNALS TOTAL are required for CD4+ T cell activation
- signal #1: MHC class II + peptide --- TCR
- signal #2: between costimulators
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Costimulators
- molecules required in addition to the TCR to activate naïve (have not yet encountered antigen) T cells via signal transduction
- costimulators on T cell surface interact with molecules on the surface of an APC to provide a costimulator (2nd signal)
- eg. CD28 (T cell) --- B7 (APC)
- CD40 Ligand/CD40L/CD154 (T cells) --- CD40 (APC)
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How do costimulators come about on APC & T cell surfaces?
- APC: induced AFTER exposure to pathogen
- T cell: some up-regulated during response
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What is the key APC for the activation of naïve T cells?
the dendritic cell
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_______ induce maturation of dendritic cell in tissue
- pathogens induce maturation of dendritic cell in tissues
- phagocytosis and antigen processing of pathogens up-regulates MHC class II & costimulators, changing the surface of the dendritic cell
- causes DC to migrate out of tissue --> the draining lymph node
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Adjuvant
- a molecule (frequently synthetic) that upregulates costimulators & TLRs on APCs to give primary response a boost
- necessary because many harmless molecules do not produce an immune response
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Events in T cell Activation
- 1. CD4 moves closer to TCR & pulls with it kinases
- 2. activated Zap-70 sends a message & activates 3 different sets of pathways
- 3. transcription factors are activated --> move into nucleus and transcribe genes (occurs within ~72 hours after initial activation)
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Which (3) key genes are transcribed during T cell activation?
- 1. cytokine genes (*IL-2)
- 2. cytokine RECEPTOR genes (IL-2Rα chain)
- 3. homing molecule gene expression is changed (cell surface molecules that influence where cells moves in body)
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What occurs as a result of the change in expression of homing molecule genes?
activated T cells leave the lymph node and move into tissues, generally at the site where pathogen was first encountered
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IL-2
- T cell growth factor
- the binding of IL-2 to its high-affinity receptor (IL-2R) expressed on activated T cells results in huge proliferation & clonal expansion of antigen-specific T cells
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What does the costimulator pair B7 --- CD28 function to do?
- it stabilizes IL-2 mRNA
- in the absence of this signal, IL-2 mRNA is rapidly degraded
- (B7 on the APC/DC, CD28 on the T cell)
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Cyclosporine A is fungal metabolite used to prevent graft/transplantation rejection. How does it accomplish this?
- it complexes with calcineurin, INHIBITING T cell activation & preventing cytokine synthesis that activates effector cells to reject the foreign tissue
- calcineurin: phosphatase that ACTIVATES T cells
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Effector T cell
- cell that is now ready to exert its function
- the change in honing & adhesion molecules on the surface of the cells as a result of gene rearrangement transforms a naive T cell --> effector T cell
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CD4+ T cells
- which synthesize and secrete a vast array of cytokines
- act as helper cells for B cell antibody synthesis, & CD8+ T cells, which directly kill cells
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cytokines are pleiotropic
- one cytokine can act on many different cells
- many different cell types can make the same cytokine
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What are 3 different ways cytokines can exert their effects?
- 1. autocrine = affects the same cell
- 2. paracrine = affects nearby cells
- 3. endocrine = secreted into the circulation
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Interleukin 4 (IL-4)
- TH2 cytokine that induces B cells to syntheze IgE
- synthesized by CD4+ T cells (TH2), mast cells, & others
- (anti-IL-4 agents used to treat some forms of asthma)
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IL-5
- TH2 cytokine that activates eosinophils
- anti-IL-5 agents used to treat some forms of asthma
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Interferon-γ (IFN-γ)
- signature TH1 (a CD4+ T cell subset) cytokine that activates NK cells & macrophages to participate in cell-mediated immunity & kill infected cells of the body
- also induces B cells to switch to synthesizing antibody isotypes that activate complement (key effector pathway in the response to many types of bacteria)
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Tumor necrosis factor-α (TNFα)
- activates cells in the inflammatory response
- synthesized by macrophages and NK cells
- (anti-TNFα agents are used to combat rheumatoid arthritis)
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What are the 4 major subsets of cytokine-synthesizing CD4+ T Cells?
- TH1: IFNγ, IL-2
- TH2: IL-4, 5, 13
- TH17: IL-17, 22
- Treg: TGF-β, IL-10
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What cytokines and effects does the CD4+ T cell subset TH1 have during an immune response?
- cytokines: IFNγ, IL-2
- act on macrophages, NK cells, CD8+ T cells, B cells to make IgG3
- cell mediated immunity
- killing of virus/bacterially infected host cells
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What cytokines and effects does the CD4+ T cell subset TH2 have during an immune response?
- cytokines: IL-4, 5, 13
- act on eosinophils, B cells to make IgE & IgG4
- respond to WORMS & allergens
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What cytokines and effects does the CD4+ T cell subset TH17 have during an immune response?
- cytokines: IL-17, 22
- act on neutrophils, epithelial cells (especially at mucosa)
- are pro-inflammatory & respond to fungi/extracellular bacteria
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What cytokines and effects does the CD4+ T cell subset Treg have during an immune response?
- cytokines: TGF-β, IL-10
- act on other lymphocytes to INHIBIT the function of other sets of T & non-T cells
- (Treg cells themselves express CD25)
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Where do the cytokines that drive the differentiation of naïve CD4+ T cell into a particular subset (TH1, TH2, TH17, or Treg) come from?
- cells of the innate immune system, particularly dendritic cells
- innate immune system cells shape the adaptive immune response
- IL-12 --> TH1 cell development
- IL-4 (source unclear) --> TH2 cell development
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cytokines synthesized by one CD4+ T cell subset inhibit the development or function of other subsets
- this results is a skewed pattern of the CD4+ T cell responses
- IFNγ & IL-2 made by TH1 INHIBIT TH2's from making IL-4, 5 & 13
- (the reverse applies as well)
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Helper T cells (follicular T helper cell, Tfh)
- CD4+ T cells that interact with B cells to induce antibody synthesis
- occurs in secondary lymph node germinal centers
- CD4+ T cells are required for most B cells to synthesize antibody in response to a TD-antigen
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linked recognition
- how in response to a TD antigen the cooperating Helper T & B cell may respond to different parts (epitopes) of a single antigen peptide, but the epitopes are part of the same protein
- this linked recognition occurs in the germinal center of secondary lymphoid organs (eg. lymph nodes)
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TD-antigen B cell activation
- 1. BCR (B cell receptor = antibody) binds to antigen
- 2. antibody/antigen complex is taken up by cell
- 3. antigen is broken down in acid compartments to smaller peptides
- 4. specific antigen peptides bind to MHC class II
- 5. peptide-MHC class II complexes are trafficked to the cell surface
- 6. here it interacts with a CD4+ T cell that has the matching TCR for the antigen peptide (1st signal…)
- 7. CD4+ T cell CD40L binds to B cell CD40 (2nd signal) -->
- B cell makes antibody & T cell is activated to proliferate cytokines
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What two CD4+ T cell derived cytokines induce class-switch recombination?
- TH2 made IL-4
- TH1 made IFN-γ
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What defects can cause hyper-IgM syndrome?
- 1. nonfunctional CD154 (CD40L) in boys, X- linked hyper-IgM syndrome
- 2. defective CD40
- 3. defective AID (enzyme required for class switch recombination)
- *any defect in CSR --> hyper IgM syndrome
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thymus independent (TI) antigens
- important antigens don't require helper T cells to make antibody
- these include polysaccharides/lipopolysaccharide components of bacterial cell walls
- responses to TI antigens don't normally produce T cell-derived cytokines, B cells do not undergo Ig class switch
- only IgM is synthesized
- IgM is not expressed on B memory cells, memory B cells DO NOT develop from TI antigens
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What are two bacteria that produce TI (thymus independent) antigens & therefore create no memory B cells after infection?
- 1. Hemophilus influenzae
- 2. Streptococcus pneumonia
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conjugate vaccines
- purified capsular polysaccharide from the bacterium conjugated to a protein --> generate T cell epitopes
- allow bacterial components that usually make TI antigens to be recognized by appropriate TCRs, generating a thymus DEPENDENT immune responses in which B cell class switching occurs & memory develops
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CD8+ T cells
- kill host cells that have been infected by pathogens, particularly viruses
- commonly referred to as cytotoxic T lymphocytes (CTL) or killer T cells
- play a role in transplantation rejection and the destruction of tumor cells
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effector cells
- CD8+ T cells that have emerged from the thymus and been activated
- occurs via the same two-signal paradigm
- #1 peptide/MHC class I interact w/ TCR
- #2 costimulator signals
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What is required in the responses to most viruses (eg. HIV)?
activation of virus-specific CD4+ T cells is required for the activation of virus-specific CD8+ T cells
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What two new events occur upon CD8+ T cell activation?
- 1. formation of granules that contain cytotoxic proteins
- 2. expression of the cell surface molecule Fas ligand (FasL or CD95)
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CD8+ T cells Kill via Two Pathways
- 1. contents of granules in activated CD8+ T cell pass into the target cell --> activate apoptotic mechanisms --> cell death
- 2. interaction of Fas Ligand (CD95) on the CD8+ T cell with Fas on the target cell --> apoptoses the target cell
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What are the major granule constituents involved in CD8+ T cell target-cell killing?
- perforin: molecule that polymerizes to form ring-like transmembrane pore in target-cell membrane
- granzymes: pass into target cell through perforin made pores & interact with intracellular components to induce apoptosis
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What is a signal that TERMINATE CD8+ T cell activation?
- 1. induction of CTLA-4 (CD152) on activated T cell surface
- CTLA-4 (CD152) competes with CD28 to bind to B7 on APC surface
- unlike the CD28-B7 interaction, B7-CTLA-4 transmits a negative signal to the activated T cell, turning off the response
- [CTLA-4 (CD152) can be used in therapies, such as melanoma, to dampen T cell response]
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Memory Cell
a lymphocyte – a CD4+ or CD8+ T cell or a B cell – that has been stimulated by antigen (in a primary response) and that is activated in a second or subsequent response by the same antigen
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Thymus Dependent (TD) Antigen
an antigen that requires T helper cells to cooperate with B cells to synthesize antibodies
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Thymus Independent (TI) Antigen
an antigen that does not require T helper cells for B cells to synthesize antibodies
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Which antigens trigger which responses?
- • Infectious pathogens (TD) – eg. viruses and bacteria
- CD4+ T cells, CD8+ T cells, antibody (IgM, IgG, IgA or IgE) & γδ T cells (especially mycobacteria)
- • “Harmless” TD antigens – eg. vaccine protein
- CD4+ T cells & antibody (IgM, IgG, IgA or IgE)
- • Worms and allergens
- CD4+ TH2 cells & IgE antibody
- • TI antigens – eg. bacterial polysaccharide
- IgM
- • Tumors
- if immune response is made, predominantly CD8+ T cells (NK, if no MHC class I expression)
- therapies = enhance immune response (by injecting tumor antigens expressed on DC (prostate cancer), or inhibiting turn off signals)
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