A ____ consists of one or more species of microorganisms growing in a nutrient growth medium often at specific temp
Culture
A culture consisting of ONLY 1 species of microorganism is called a what?
Pure Culture
The composition of nutrients that all organisms require to grow and survive is called a ___ medium.
Culture
A liquid solution in which microbes, especially microbes & protozoa, will grow is known as a ___ ___.
Nutrient Broth
A broth supplemented with a solidifying agent that produces a relatively solid medium on which bacteria and fungi easily grow is called what?
Agar
Agar is a polymer of what extracted from what?
Galactose extracted from cell walls of red algae
Agar liquifies at ___o C and solidifies at ___oC.
100 and 40
Describe a "circular" form of a colony.
Circular w/smooth edges like and "O"
What type of microscope utilizes visible light to magnify and resolve objects?
Compound light microscope
Which staining technique uses 2 contrasting colored stains to allow bacteria to be separated into 1 of 2 grps and also visualize structures such as endospores and capsules?
Differential Staining
What are the 3 purposes of simple staining?
Measure cell size
Determine cell shape
Determine cell arrangements
What are the 3 main purposes of differential staining?
Cell size, shape and arrangements
Separate Gram-pos & Gram-neg
Visualize cell structures
Define working distance as it relates to microscopy.
Proximity of the slide to the bottom of the objective lens
What aspect of microscopy pertains to the light-bending ability of glass, oil and air media thru which light must pass during image formation?
Refractive Index
What are 3 types of basic stains?
Methylene Blue
Crystal Violet
Safranin
Basic stains carry a ___ electrical charge.
Positive
The ___ stain technique allows us to see unstained bacteria on a stained background and determine their morphology.
Negative
____ stains such as nigrosin, congo red & india ink carry a neg charge & are therefore what?
Acidic
Repelled by negatively charged bacteria
What are the steps in preparing a bacterial smear?
Asceptically place bacteria on glass slide
Air dry and heat fix
Stain appropriately
Rinse, dry and view
Define a bacterial smear.
Thin layer of bacteria placed on a slide for staining
If agar slants are used when making a bacterial smear then a what should be added to the slide as well?
A loopful of water
What are the 3 things accomplished by heat fixing?
Kills any bacteria that may still be alive
Facilitates stain penetration
Fixes cells to the slide so they do not wash off when stained
Simple staining is an easy way to determine what 3 things about bacterial cells?
Size
Shape
Arrangement
Name 3 basic stains we discussed?
Methylene Blue
Crystal Violet
Safranin
The ___ ___ technique permits one to see unstained bacteria on a stained background & determine their morphology.
Negative stain
Nigrosin, congo red & India ink are ___ stains that carry a ___ charge and are therefore repelled by ____ charged bacteria.
Acidic
Negative
Negatively
What form of bacteria found in dental plaque are best stained in a negative manner and why?
Spirochetes b/c they do not stain well with other techniques
The use of excessive stain when utilizing the negative stain technique causes what problem?
It makes the organisms difficult to locate
Negative stain must not be allowed to become contaminated because. . . .
It will support bacterial growth
What is the quick procedure for the negative stain technique?
Add loopful of bacteria at end of slide
Place sm drop of acidic dye at end w/bacteria
Pull dye/bacteria mix across face of slide w/ second slide
Air dry and observe
What are 2 advantages to the negative stain technique?
It does not distort bacterial cells
Some cells such as spirochetes dont stain well w/other techniques
T or F. Negatively stained slides are air dried and heat fixed.
False - Air dried ONLY
When the negative stain technique is used what are we looking for in the microscope?
White or clear cells on a colored background
When labeling a diagram of a slide what should we note?
Size, shape, arrangement
Full binomial name
Total magnification
Dye used
What is a second method for preparing a negative stain?
Prepare air dried smear
Pass a felt tipped marking pen several times over the smear
Ink will stick to slide & bacteria will appear white against colored background
Why do we not heat fix bacterial smears iN negative staining?
B/c it will disrupt the bacterial cells
What is aseptic transfer?
Sterile, microbe free mvmt or transfer of microorganisms fr one medium to another.
Why do we use aseptic technique?
In order to maintain pure cultures & create subcultures
What is the red pigment produced by S. marcescens called?
Prodigiosin
What are 3 advantages of the streak plate technique over the pour plate technique?
No time constraints due to agar cooling
Less likelihood of contamination
Easier access to bacterial colonies
Why do we incubate plates in the inverted position?
So when condensation forms on the lid it doesn't fall into the cultures
In 1884 ___ ___, a Danish physician, discovered certain bacteria aft being stained w/crystal violet & iodine, would lose their color on subsequent tx w/alcohol while other bacteria would retain the color.
Christian Gram
When Gram staining bacteria that retain crystal violet stain are known as ___-___ & those that do not are ___-___.
Gram positive
Gram negative
Gram staining is classified as a ____ staining technique.
Differential
What 2 types of bacteria do not respond to Gram staining?
Spirochetes & Mycobacteria
___ ___ & ____ form a complex that exits easily fr Gram neg bacteria but not fr Gram pos when ___ is applied.
Crystal violet
Iodine
Alcohol
What is it in the cell walls of Gram positive bacteria that trap the crystal violet/iodine complex?
Peptidoglycan
What is it that makes Gram pos cell walls retain the crystal violet/iodine complex and causes Gram neg walls not too?
Gram pos bacteria have larger amts of peptidoglycan in their cell walls that traps the complex whereas Gram neg walls have less & fail to retain it
The Gram stain technique is a ___ part procedure in which 2 dyes, a ____(iodine) & a ___ agent are used.
Four
Mordant
Decolorizing
Other than a culture what supplies are needed for a Gram stain procedure?
Crystal violet stain
Grams Iodine
95% ethyl alcohol
Safranin stain
What are the steps in a Gram stain?
Prepare air dried, heat fixed smear
Apply crystal violet & set for 1 min
Rinse
Flood w/Grams iodine & set for 1 min
Rinse
Decolorize w/95% ethyl alcohol for 15 sec, x2
Rinse
Counterstain for 30 sec
Rinse
Blot dry w/bibulous paper
The iodine in a Gram stain acts as a mordant which means what?
It increases the affinity of dye to the cell by forming a complex w/the stain
As a general rule how long should decolorization go on for?
Until the ethyl alcohol running off is no longer purple
What is the possible result of excessive decolorization in Gram staining?
Gram pos bacteria may lose their color and appear Gram neg
What is the possible result of insufficient decolorization when performing a Gram stain?
Gram neg bacteria may retain purple color and appear Gram pos
Prior to counterstaining in the Gram technique what would the slide look like under a microscope?
Gram pos bacteria would appear purple & Gram neg bacteria would appear transparent
What effect will safranin have on Gram pos bacteria?
None
After decolorization, flood smear w/____ for ___ secs.
Safranin
30
Gram pos bacteria will appear ___ to ___ & Gram neg will appear ____ to ____.
Blue to purple
Orange to Red
When observing Gram stained slides, be sure to confine your work to areas containing thin smears of bacteria b/c why?
Thicker areas may resist decolorization due to heavy concentration of bacteria
Endospores are formed by members of several gram-___ bacterial genera such as ____ &____.
Positive
Bacillus and Clostridium
What are 3 characteristics of endospores?
Resist boiling for 2 hrs or more
Contain little water
Exhibit few chem reactions
What happens to spores when the chem environment are favorable?
Protective layers break down & vegetative cells emerge to grow & reproduce
Name 4 notable diseases caused by sporeformers.
Tetanus
Botulism
Gas gangrene
Anthrax
What name is given to a layer of polysaccharides & proteins secreted by certain bacteria including pathogens?
Capsule
What functions does a capsule perform?
Buffer between cell & its external environment
Protects against dehydration
Traps nutrients fr surrounding environment
Contributes to est of disease
Helps resist phagocytosis
A thin flowing capsule isnt really a capsule at all. It is called a ___ ___.
Slime layer
The term ____ refers to both capsule and slime layer
Glycocalyx
____ are protein appendages that facilitate motion of bacteria?
Flagella
Many species of bacterial ___ & ___ & a few species of ___ possess flagella
Rods & spirilla
Cocci
Why is it that flagella are so long but cannot be seen with a light microscope?
B/c although they are many times longer than a cell they are extremely thin
What is the purpose of the spore stain technique?
To contrast vegetative cells fr endospores
Why is it that bacterial endospores cannot be penetrated easily by stain using simple or Gram stain techniques?
B/c they contain numerous protective layers
What do we do to assist with stain penetration when staining bacterial endospores?
Apply heat
What stain do we use as the primary stain for spore stain?
Malachite Green
When doing a spore stain we should allow the slide to remain over ___ for ___ mins, continually adding stain.
Steam for 3 mins
Heat during spore stain does what?
Forces stain into endospores & vegetative cells
When rinsing spore stained slides vegetative cells will ___ their color while endospores will what?
Lose
Remain green
When spore staining we counterstain w/___ for __ min. This will have what effect?
Safranin for 1 min
this will stain the vegetative cells but have no effect on the spores
When spores are found within vegetative cells, their position could be ___, ___ or ___.
Central, subterminal, terminal
Young cultures often contain spores within ___ ___ while older cultures contain more free ___ & fewer ___ ___.
Vegetative cells
Spores
Vegetative cells
When utilizing the alternate spore stain technique, we cover the smears w/___ ___ ___ for how long?
7 1/2% malachite green
10 minutes
Visualization of the bacterial capsule by staining is a 2-step procedure involving both ___ & ___ staining.
Negative & simple
Why is it that water or heat should not be used in any step of capsule staining?
Capsules are easily destroyed by both
Why is it helpful to use milk cultures of organisms when capsule staining?
Media containing milk encourage capsule production
What are the quick steps to produce a capsule stain?
Prepare neg stain of bacterial smear
Stain w/crystal violet for 1 min
Rinse w/ SALINE SOLUTION, dry, observe
When viewing capsule stain, what are we looking for?
Purple cells surrounded by capsules which appear as white halos
What are 2 methods for determining motility?
Hanging drop technique
Utilizing motility agar
What characteristics of motility should we not when viewing our slide?
Patterns of motion
Where cells accumulate
Relative shapes & sizes
Configurations displayed
Speed of mvmt
Erratic vibrations of cells in place & lack of directed mvmt demonstrates a phenomena called what?
Brownian Mvmt
What causes Brownian mvmt?
Molecules striking organisms & displacing them briefly
What is motility test agar?
Semisolid growth medium containing a reduced amt of agar
What is special about semisolid motility agar?
The semisolid state allows bacteria to move freely throughout the medium
How will motile organisms present in test agar in comparison to non-motile organisms?
Motile organisms will spread away fr the inoculation line & est broad zone of growth where nonmotile organisms will grow only along the line of inoculation
Name 3 characteristics that are used to help ID an organism.
Size, Shape, Arrangement
Response to staining
Presence of spores, capsules, flagella
Why is it necessary to invert plates when incubating them?
B/c condensation develops on the lid of the plate & we don't want it to drip on the culture
In ____ colonies, bacteria form many hairlike filaments as they grow outward from the center of the colony.
Filamentous
____ colonies grow outward in fewer and thicker filaments, like the roots of a miniature tree.
Rhizoid
____ colonies bulge up from the plate in a pronounced semicircle.
Convex
____ colonies look like raised colonies, but they have a small projection in the middle.
Umbonate
____ colonies resemble raised colonies, but they have a tiny depression like a dimple in the middle.
Crateriform
The ___ describes the edge of a bacterial colony.
Margin
A colony where the edge is lumpy and irregular is considered to be what shape?
Undulate
Some margins are ____, with tiny filamentous strands of bacteria growing out from a central mass.
Filiform
____ margins have a wavelike edge, while ____ margins have fingerlike projections growing outward from the edges of the colony.
Curled
Lobate
Cloudyness in a broth culture is described as being ____.
Turbid
A broth culture that contains small particles is said to be what?
Granular
A broth culture that contains small masses is said to be ____.
Flocculent
Broth cultures that contain large particles are described as ____.
Flakey
Sediment at the bottom of a tube that clumps together is said to be ____.
Viscid
Aerobic growth is located where in a thioglycollate medium tube?
Growth at the top of the tube
Growth at the bottom of a thioglycollate tube indicate what type of growth?
Anaerobic Growth
Growth throughout a thioglycollate tube indicates what type of growth?
Facultative Growth
Why is it said that biochemical characteristics serve as fingerprints for a bacterial species?
B/c the results of a series of biochemical tests can help to ID an unk organism & potentially ID a disease
What is contained in Bergey's Manual of Systematic Bacteriology?
Std results for the biochemical tests we performed
___ is a type of microbial metabolism which an organic intermediary molecule serves as an electron acceptor
Fermentation
What are the two products of fermentation that our tests looked for?
Carbon dioxide gas production
Acid production
What is the media used in fermentation testing consist of?
For our carbohydrate test we used phenol red indicator. This solution is ___ in neutral or basic solutions & ___ in acidic solutions.
Red
Yellow
What item was added to our fermentation test tubes to indicate the formation of gas?
Durham tube
____ is a poly saccharide consisting of thousands of glucose molecules chemically bonded to one another.
Starch
Certain bacteria utilize this enzyme to biochemically break bonds between glucose monomers.
Amylase
What indicator do we use to test for starch digestion and how does it indicate?
Iodine
It is added to determine whether starch is still present or has been digested
What does starch normally do in the presence of iodine?
Forms a blue black chemical complex
Catalase is an enzyme that breaks down ___ ___ to ___ & ___.
Hydrogen peroxide
oxygen & water
Why is catalase important in the bacterial metabolism?
Hydrogen peroxide produced during energy yielding processes must be broken down
What happens if hydrogen peroxide fr energy yielding processes is not broken down by catalase?
It will accumulate and kill the cells?
Why is hydrogen peroxide generally a poor antiseptic?
B/c it is rapidly degraded by bacterial & tissue catalase
How can we test for catalase production?
Growing bacteria on a nutrient medium & the adding hydrogen peroxide
How do we know if catalase is being produced by a bacteria?
If oxygen bubbles appear & the area effervesces w/the application of 3% hydrogen peroxide
Certain bacteria produce the enzyme ____ which digests DNA into its constituent nucleotides.
DNase
How is the DNA test performed?
By incubating a bacteria on a med that can contains DNA
Add hydrochloric acid to determine whether hydrochloric acid has been produced
What chem is added to a culture grown on what med to determine if DNA has been digested?
1N HCL added to bacteria grown on medium containing DNA
DNA will normally react w/HCL & form what?
Very fine precipitate giving the media a cloudy appearance
If DNA digestion has occurred the area nr the bacterial streak will be ____ & the remainder of the plate will become ___.
Clear
Cloudy
The enzyme ___ ___ breaks down the amino acid cysteine to form ___ & ___ ___.
Cysteine desulfurase
Alanine & hydrogen sulfide
When testing for hydrogen sulfide, if Fe ions are present what happens?
They will react w/hydrogen sulfide to form hydrogen sulfide causing the medium to become black
Hydrogen sulfide has significance in the food industry. Why?
B/c it leads to black rot in eggs w/rotten egg odor
What medium is commonly used for the hydrogen sulfide test & what does it contain?
Sulfide Indole Motility (SIM) medium
It contains cysteine & Fe ions
What 3 things can be tested in SIM medium?
Hydrogen sulfide production
Indole production
Motility
___ is an end product of protein metabolism in bacteria.
Urea
Certain bacteria produce the enzyme ___ which breaks down urea into ___ & ___.
Urease
Ammonia & carbon dioxide
Urea digestion is important in ___ cycles in the soil b/c urea is a major component of animal ___ & bacteria are responsible for ___ ___ ___ to release nitrogen for reuse.
Nitrogen
Urine
Breaking it down
In the test for urea digestion, bacteria are inoculated to a nutrient broth that contains what 2 things?
Urea & phenol red indicator
If urea is digested during incubation, ammonia will ___ the pH of the medium and cause the indicator to become what color?
Raise
Deep fuchsia or purple
Certain bacteria secrete enzymes called lipases that ___ the ___ in lipids.
Hydrolyze linkages
When lipase hydrolyzes linkages in lipids, what is separated?
Glycerol molecule fr fatty acid molecules
What happens to glycerol & fatty acid molecules that result fr lipids broken down by lipases?
They are transported into the bacterial cytoplasm & used as building blocks for new cell structures & as energy sources
What is the name given to a type of food spoilage in which foul odors & flavors develop b/c of fatty acids released fr lipids
Rancidity
What 3 foods are particularly susceptible to rancidity?
Butter, vegetable oil & fish
What special medium is used to test for lipid digestion?
Spirit Blue agar
Spirit blue agar is rich in ___ & contains spirit blue which is an indicator for what?
Lipids
pH
Spirit blue agar is ___ ___ in a neutral environment but becomes ___ ___ in the presence of acids.
Pale lavender
Deep blue
If spirit blue agar becomes then the bacteria being tested are what causing what?
Able to digest lipids causing fatty acids to accumulate & pH to lower