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How big are viruses?
- submicroscopic particles
- 20 - 150 nm (1 one thousandth of a micron, 1 one millionth of a millimeter)
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What kind of microscope do we need to use in order to see a virus?
electron microscope
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What do viruses contain?
either RNA or DNA
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Where do viruses replicate?
- only in living cells
- can exist in the environment, but can not replicate in the environment
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What are obligate intracellular parasites?
parasites that can only replicate in living cells and can not replicate in the environment
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Define virion.
a virus particle
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Define viremia.
virus in the blood - spreading from point A to point B
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Define incubation period.
from infection till the animal shows clinical signs
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How long is the incubation period for viruses?
about 3 - 5 days
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Viruses grow ____ than bacteria but _____ than fungi.
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Viruses are _____ covered by _____.
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What are capsomeres?
individual viral proteins that make up the capsid.
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What is the capsid?
protein covering the nucleic acids
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What are the purpose of nonstructural proteins?
enzymes that allow for take over of hot's biosynthetic apparatus - allows the virus to take over the cell
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What are some examples of nonstructural proteins?
- RNA reverse transcriptase
- polymerases
- protein kinases
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What is the envelope?
lipid and glycoprotein covering the virus to increase virulence
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Do all viruses have envelopes?
no
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What does virulence mean?
the destructiveness of the virus
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How do viruses get an envelope?
from the host cell
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What are peplomers?
glycoprotein spikes on the outside of the virus
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What is the purpose of peplomers?
helps the virus attach to the membrane of the cell
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Do all viruses have peplomers?
no
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What are the different RNA viruses?
- Reovirus
- Rhabdovirus
- Retrovirus
- Paramyxovirus
- Orthomyxovirus
- Togavirus
- Coronavirus
- Calicivirus
- Arenavirus
- Picornavirus
- Bunyavirus
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What are some Caliciviruses?
- Feline calicivirus
- Vesicular exanthema
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What are the clinical signs of the Feline calicivirus?
- upper respiratory infection
- lesions in the mouth
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What species does Vesicular exanthema (calicivirus) affect?
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What are some Picornavirus?
- Foot and mouth disease
- Swine vesicular disease
- SMEDI
- Rhinovirus in the horse
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Foot and mouth disease is an exotic disease. How did we get it this way?
test and slaughter
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What does an exotic disease mean?
it is not seen in our country, only in other countries
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What does the rhinovirus (picornavirus) in horses cause?
upper respiratory infection
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What is the main Rhabdovirus?
rabies
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What is rabies?
neurologic disease seen in all mammals
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Which types of animals can not get rabies?
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How is rabies spread?
- spread by bites
- virus is in the saliva
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Which states are number 1 and 2 in having the rabies virus?
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Why is the rabies virus mainly seen in wildlife?
because we vaccinate our domestic animals
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What are some Paramyxoviruses?
- Canine distemper
- Canine parainfluenza
- Bovine parainfluenza 3 (Bovine PI3)
- Respiratory syncytial virus
- Rinderpest
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Is the Canine distemper (Paramyxovirus) tissue specific and species specific?
no, can affect different types of tissue in the body and can affect more than just dogs
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What does the Canine parainfluenza virus (Paramyxovirus) cause?
upper respiratory infection
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Which Paramyxovirus an exotic disease?
Rinderpest (seen in Africa)
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What are some Coronaviruses?
- TGE (transmissable gastroenteritis)
- FIP
- Canine coronaviral enteritis
- Feline enteric coronavirus
- Bovine neonatal diarrhea
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What animal does TGE (Coronavirus) affect?
pigs
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What are some Togaviruses?
- EEE (eastern equine encephalitis)
- WEE (western equine encephalitis)
- VEE (venezuela equien encephalitis)
- BVD
- Hog cholera
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What does the Togavirus require in order to be spread?
arthropod vector
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Which Togavirus is exotic?
Hog cholera
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Do we see Togaviruses in carnivores?
no
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What are some Reoviruses?
- Rotavirus enteritis
- Bluetongue virus
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What do Reoviruses cause in most species?
enteritis and respiratory diseases
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What species gets Bluetongue virus (Reovirus)?
deer
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Are Reoviruses common?
no
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What are some Retroviruses?
- Oncornavirus (bovine and feline leukemia)
- Lentivirus (Caprine Encephalitis Arthritis, Equine Infectious Anemia, FIV, Visna-maedi)
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How are Lentiviruses spread (Retrovirus)?
by direct contact such as biting
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What are the DNA viruses?
- Pox virus
- Parvovirus
- Herpesvirus
- Adenovirus
- Papovavirus
- Iridovirus
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What are some Pox viruses?
- Cow pox
- Orf (sheep) - Contagious ecthyma
- Horse pox
- Avian pox
- Monkey pox
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Which Pox virus is the most common?
Avian pox
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What part of the body do Pox viruses usually infect?
skin
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Are pox viruses seen in carnivores?
no
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What are some Herpes viruses?
- Infectious Bovine Rhinotracheitis
- IPV (pustular vulvovaginitis)
- Malignant catarrhal fever (hoof stock)
- Equine rhinopneumonitis
- Feline rhinotracheitis
- Canine herpes
- Marek's disease (chickens)
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What is the main clinical sign for herpes viruses?
mostly respiratory
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What are some Parvoviruses?
- Canine parvovirus
- Feline panleukopenia
- Porcine parvovirus
- Raccoon parvovirus
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What are some Adenoviruses?
- Infectious canine hepatitis
- Canine adenovirus 2 (kennel cough)
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What are the three diseases that cause kennel cough?
- Canine adenovirus 2
- Canine parainfluenza
- Bordetella
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What do Adenoviruses usually cause?
respiratory/GI diseases
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What are some Papavoviruses?
Papillomatosis (warts)
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What species is Papillomatosis (Papvovirus) common in?
cows and dogs
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What are some Flaviviruses?
West Nile virus
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What does West Nile virus (Flavivirus) cause?
encephalitis
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How is West Nile virus (Flavivirus) transmitted?
by insects
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What are some Circoviruses?
- Porcine circovirus
- Psitticine Beak and Feather Disease
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What are some Filoviruses?
Hemorrhagic diseases in primates (Ebola, Marburg, Reston)
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What are the steps of how the virus effects the cell?
- Attachment: must get to cell and attach to it first
- Penetration: penetrates the cell - pinocytosis - brings the cell in
- Uncoating: protein coat and envelope go away - now it's a "naked cell"
- Biosynthesis: nucleic acid from the virus gets into the nucleic acid from the cell and makes the cell stop doing it normal function and start making more of the virus
- Maturation and Release: virus either reassembles in the cell and destroys the cell or leaves the cell to go to another one and starts the process over again
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What are the different types of infection?
- clinical
- subclinical
- persistent
- latent
- carrier
- slow
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What are clinical infections?
shows signs
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What are subclinical infections?
does not show any signs
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What are persistent infections?
lingers in the body
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What are latent infections?
virus is in equilibrium with the immune system - the virus is not doing anything until soemthing suppresses the immune system
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What are carrier infections?
shed the virus even after recovery
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What are slow infections?
long incubation periods
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What are the different routes of infection?
- inhalation
- ingestion
- direct contact
- in utero
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What does "horizontal spread" of an infection mean?
spread from animal to animal
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What does "vertical spread" of an infection mean?
spread from mother to offspring
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What are the different types of Host Immune Responses we have to fight off viruses?
- Interferon
- Macrophages
- Immunoglobulins
- Cell-Mediated Immunity
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What is interferon?
produced mostly by T-lymphocytes that then produce antiviral proteins which stops the penetration of the virus into other cells and protects the other cells
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Is interferon immune response specific or non-specific?
non-specific which means there isn't one for each specific virus...they work for all the viruses
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What do macrophages come from?
monocytes
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What do macrophages do?
- engulf the virus
- make interleukin - 1 which is a chemical that activates T-lympohocytes to kill cells
- T lymphocytes kill the macrophages
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What are immunoglobulins?
antibodies
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Are immunoglobulins specific or nonspecific?
specific to each virus
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How do immunoglobulins work?
- there is in increase in immunoglobulins M within 7 days of the first exposure to the viruse
- B lymphocytes increase in 10 - 14 days after exposure
- After 2 weeks there is an increase in immunoglobulins G
- Anamnestic (memory) response with a second exposure
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What is a cell mediated immunity?
- Macrophages process virus for the T cells
- T cells then become cytotoxic
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How are viral diseases often diagnosed?
clinical signs
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How do we definitively diagnose a viral disease?
lab testings
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What do we need before we do diagnostic testing? Why?
suspicion of what virus it is, tests are very specific - different tests for each virus
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What are the two types of tests?
- antibody tests
- antigen tests
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What are antibody tests?
tests for antibodies, can only tell us if the animal has been exposed to something and has the antibodies - does not tell us if the animal currently has the active form of the virus
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What are antigen tests?
determines if the virus is active in the animal
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What are the general findings of an animal with a virus?
- characteristic history
- characteristic signs/lesions
- changes in CBC
- biochemical changes (relate to organ system that is affected)
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What are some changes we will see on a CBC?
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What is histopathology usually done?
once the animal is dead
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What does a DNA virus look like in a histopathology?
intranuclear (in nucleus)
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What does a RNA virus look like in a histopathology?
intracytoplasmic (in cytoplasm)
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What are different ways we can see the virus?
- electron microscopy
- immunostaining (immunofluorescence)
- radial immunodiffusion RID
- polymerase chain reaction (PCR)
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Where does the electron microscope usually see the virus?
in tissue/discharge
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Who usually uses an electron microscope?
research labs
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What does the electron microscope use to see the virus?
electron rays
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How much does an electron microscope magnify?
50,000X
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Why do we rarely culture viruses?
because they can't grow in the environment
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What is the time frame for collecting infected tissue for a culture of a virus?
- within 4 days of seeing signs
- within 8 hours after death
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If we send a culture off to a lab how does it need to be sent?
- kept cold
- sent to lab quickly
- viral transport medium used to keep bacteria under control
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What are the three main ways to isolate the virus?
- cell (tissue) culture
- embryonated eggs
- animal inoculation
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How do we use cell culture to isolate a virus?
inject sample into cell/tissue and then look for cytopathic effects
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What kind of cytopathic effects do we look for after a cell/tissue culture?
- cell lysis
- cell agglutination
- inclusion bodies
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What are continuous cell lines?
cells that divide indefinitely in vitro for a cell culture
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How do we use embryonated eggs to isolate a virus?
inject virus into specific part and then look for lesions in the embryo
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How do we use animal inculation to isolate a virus? What kind of animals do we use and why?
- inject the disease into a live animal and then look for lesions
- mice because they are small and don't take up a lot of space
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What do serological tests depend on?
the type of virus
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What do serological tests measure?
antibodies (indicates that the virus was present at some point in time)
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What are measured in serological tests?
titers
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What are titers?
how great the antibody response is
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How do we do a serological test?
- take two different types of samples (acute - right when the animal is showing signs and convalescent - after being treated)
- need to see a 4x increase in the titer for the convalescent sample
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What are the different serological tests?
- hemagglutination
- hemagglutination inhibition
- complement fixation
- virus (serum) neutralization
- immunostaining - IFA
- AGID (agar gel immunodiffusion)
- immunoflurescence
- ELISA
- radioimmunoassay
- immunodiffusion
- complement fixation
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Which serological tests measure antibodies and titers?
- hemagglutination
- hemagglutination inhibition
- hemadsorption
- complement fixation
- virus (serum) neutralization
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Which serological tests give us yes or no answers?
- immunostaining - IFA
- AGID (agar gel immunodiffusion)
- ELISA
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What does IFA stand for?
immunofluorescent antibody - this test is not necessarily just an antibody test, it tests for antigens too
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What are the two types of immunostaining?
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What does direct immunofluorescence?
- antibody to a specific virus is labeled with a fluorescent dye
- if no virus is present then the fluorescent antibody washes away
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Is IFA direct or indirect?
both
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What does IFA use to test?
flurescent microscope
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What shows up if positive in a IFA test?
yellow-green fluorescence
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What do ELISA tests detect?
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Are ELISA tests sensitive?
yes
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What indicates a positive result in an ELISA test?
color change
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Are ELISA tests common in house tests?
yes
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What are agglutination tests?
reaction of particular antigen with antibodies to form visible aggregates
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What are different types of agglutination tests?
- slide tests
- card tests
- tube tests
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How do we do an agglutination test?
- start with particle that has antigen bound to it (RBCs, bacteria, latex)
- add sample
- if sample contains antibodies it will bind with the particle and agglutination will occur
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How do we do a hemagglutination test?
- serially dilute sample (dilute more and more for each sample)
- add sensitized RBCs
- titer is the first tube where we see clumping (cloudy bottom) - this is the result of the test
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How do we do a hemagglutination inhibition?
- combine sample and virus and allow to bind
- add RBCs of appropriate species
- if antibodies are present then RBCs will bind with the virus and there will be no agglutination
- if antibodies are not present then the virus is free to attack RBCs and agglutination will be present
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Is the end result of the hemagglutination inhibition the opposite of the end result of a hemagglutination test?
yes, the titer is the first tube where clumping is inhibited in the hemagglutination inhibition whereas the titer is the first tube where there is clumping for the hemagglutination test
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What is the latex agglutination test?
- latex particles are coated with antibodies agglutinate when mixed with antigen
- easy to perfom
- fast results
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How do we do a virus neutralization in a cell culture?
- incubate sample with virus
- place in cell culture
- look for effects on plate
- if antibodies are present they neutralize the virus so it cannot infect cells
- if antibodies are not present, the virus infects cells and causes visible damage
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How do we do complement fixation?
- add antigen to sample
- incubate
- add complement
- wait
- add RBCs and anti-RBC serum
- if no antibodies there is hemolysis because complement is available
- if antibodies are present, then no lysis because complement was used by first Ag-Ab reaction, see red dot
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What is electrophoresis?
- molecules separated by size and electric charge in a gel
- can look at protein and nucleic acid pattern
- nucleic acid bands are then stained
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What does Western blot test?
check for specific antibodies
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What is western blot mostly used with?
wildlife
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What is done before western blot?
electrophoresis
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What does the southern blot identify?
DNA
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What does the northern blot identify?
RNA
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What test is considered the gold standard?
polymerase chain reaction (PCR)
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What is another term for PCR?
probes
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What does the PCR test do?
- amplifies specific nucleic acids in sample
- can compare base sequence to that of known pathogen
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Is the precipitation reaction test used often?
no
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What does the precipitation reaction test determine?
antigen or antibodies in sample
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What does the Agar Gel Immunodiffusion use?
special agar plate
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How does the agar gel immunodiffusion work?
Ab and Ag in sample migrates in agar and we see precipitation line
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What test uses the agar gel immunodiffusion?
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How do we do the radial immunodiffusion - RID?
- antibody is mixed with agar and poured onto plate - uniform distribution
- samples place in well, cut into agar and will diffuse out into agar
- at point where equal numbers of Ag as Ab the complexes will precipitate out
- size of precipitation ring correlates with amount of Ag in sample
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What does radioimmunoassay use?
radioactivity
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How do we do radioimmunoassay?
- antibody to hormone is attached to filter
- add serum to the sample
- if hormone is present, it will bind to antibody on the filter
- add radioactive iodine-labeled hormone
- if hormone is not there, iodine binds to antibodies on filter
- wash (all unbounded substances will wash away)
- if hormone is present, no iodine remains
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What do we mainly use radioimmunoassay for?
hormones
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What are prions?
- proteinaceous infectious particles
- another class of infectious agents
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What do prions do?
influences proteins in brain cells to turn bad
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Are nucleic acids involved in prions?
no
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What do prions cause?
transmissilbe spongiform encephalopathies
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What are some tranmissible spongiform encephalopathies?
- bovine spongiform encephalopathy (BSE) - mad cow disease
- scrapie - sheep disease
- chronic wasting disease of elk, deer, moose
- feline spongiform encephalopathy
- variant creutzfel-jakob disease (CJD) - mad cow disease in people
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How are spongiform encephalopathies spread?
by ingestion
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How long are the incubation periods of prions?
long...years
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