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Phylogeny
The evolutionary history of a group of species or group of species
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Systematics
A discipline focused on classifying organisms adetermining their evolutionary relationships
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Taxonomy
How organisms are named and classified
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Binomial
The two part format of a biological name
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Genus
The first part of a binomial
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What's the order of linnaean system?
Species, genus, family,order,class,phylum,kingdom,domain
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Taxon
The named taxonomical unit at any level of the hierarchy
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Phylogenentic tree
A branchingdiagram that represents a hypothesis aboutthee evolutionary history of a groupoff organisms
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Phylocode
Proposed system of classification oforganisms based on evolutionary relationships. Only groups that include a common ancestor and all of its descendants are named
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Branch points
The divergence of two or more taxa from a common ancestor
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Sister taxa
Groups of organisms that share an immediate common ancestor
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Rooted
A branch point within the tree represents the most common ancestors of all taxa in the tree
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Basal taxon
A lineage that diverges early in the history of a group
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Polytomy
A branch point from which more than two descendant groups emerge
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Analogy
Similiaritybetween two species that is due to convergent evolution rather than to descent from a common ancestor with the same trait
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Homoplasy
An similiar analogous structure or molecular sequence that has evolved independently in two species
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Molecular systematics
The discsupine that uses data from DNA and other molecules to determine evolutionary relationships
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Cladistic
An approach to systematics in which organisms are placed into groups called clades based primarily on common descent
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Clades
A group of species that includes an ancestral species and all of its descendants
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monophyletic
Pertaining to a group of taxa that consists of a common ancestor and all of its descendants. A monophyletic taxon is equivalent to a clade
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Paraphyletic
Consists of an ancestral species and some, but not all of its descendants
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Polyphyletic
includes taxa with different ancestors
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Shared ancestral character
A character that originated in an ancestor of the taxon
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Shared derived character
an evolutionary novelty unique to a clade
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outgroup
a species or group of species from an evoutionary lineage that is known to have diverged before the lineage that includes the species we are studying
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Ingroup
a species or groups of species whse evolutionary relationships we seek to determine
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maximum parsimony
A principle that states that when considering multiple explanations for an observation, one should first investigate the simplest explanation that is consistent with facts
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Maximum Likelihood
The given certain probablity that rules about how DNA sequences change over time, a tree can be found that reflects the most likely sequence of evolutionary events
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Orthologous genes
Homologous genes that are found in different species because of speciation
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Paralogous genes
Homologous genes that are found in the same genome as a result of gene duplication
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Molecular clock
A method for estimating the time required for a given amount of evolutionary change, based on the observation that some regions of genomes evolve at constant rates
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Neutral theory
The hypothesis that much evolutionary change in genes and proteins has no effect on fitness and therefore is not influenced by natural selction
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horizontal gene transfer
The transfer of genes from one genome to another through mechanisms such as transposable elements, plasmid exchange, viral activity, and perhaps fusions of different organsims.
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