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What is the structure of an atom?
Nucleus
- Protons(+)
- Neutrons (no charge)
- Electron shell
- Electrons (-)
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Protons
Determine what the atom is, atomic number
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Electrons
Determine how the atom reacts chemically
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Neutrons
- impart little bioogical importance
- Neutrons + protons = atomic weight.
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Are atoms electrically neutral?
Yes, the total positive charge of the nucleus = the total negative charge of the electrons.
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Valence shell
- Shells can hold a specific number of electrons: 2, 8, 8, 18, 18, ect
- If the outer shell is full the element is nonreactive or inert
- If the outer shell is not full the element is reactive
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Chemical Elements
- There are 92 naturally occuring elements.
- 26 commonly found in living things.
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Elements of Life
- Element Symbol Atomic # Atomic Weight
- Hydrogen H 1 1
- Carbon C 6 12
- Nitogen N 7 14
- Oxygen O 8 16
- Sodium Na 11 23
- Magnesium Mg 12 24
- Phosphorus P 15 31
- Sulfur S 16 32
- Chlorine Cl 17 35
- Potassium K 19 39
- Calcium Ca 20 40
- Iron Fe 26 56
- Iodine I 53 127
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Molecules
Atoms interact with each other in a certain combination to form molecules
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Atomic Number
number of protons in nucleus
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Atomic weight
Total number of protons and neutrons in an atom
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Chemical element
All atoms with the same number of protons
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Electronic Configuration
The arrangement of electron shells corresponding to different energy levels
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When is an atom stable or inert?
When the outer shell is filled
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Valence
"Combining capacity" of an atom is the number of extra or missing electrons in its outermot shell
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Compound
A molecule that contains at least 2 different kinds of atoms
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Chemical Bonds
The attractive force that combines molecules and holds them together.
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Ionic Bonds
When atom gains electrons is acquires an overall negative charge If it loses electrons it gains an overall positive charge. Negatively or positively charged atom (or group of atoms) called ions.
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Ionic Bond
an attraction between ions of opposite charges that hold them together to form a stable molecule.
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Cation
An atoms whose outer electron shell is less than half filled will lose electrons and form positively charged ions
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Anion
An atom whose outer is more than half-filled and gains electron
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Covalent bonds
atoms share one or more electrons
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Hydrogen bond
Hydrogen is interacting with other hydrogen, nitrogen, and oxygen. Weaker than covalent and ionic bonds. 5% of strength of covalent bonds.
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Synthesis Reaction
two or more atoms , ions, or molecules combine to form new and larger molecules can go both ways.
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Ph**
Amount of hydrogen ions in a solution. Hydrogen makes things acidic. Scale 0-14 lower more acidic, higher more basic. Extremes will cause denaturing of proteins.
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H2O
is a polar molecule. Universal solvent.
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Buffers
compounds that keep the pH the same. Keep the pH stable.
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amino acids
Building blocks of proteins
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ATP
Adenisine triphosphate
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Toxic Shock Syndrome
Staph, tampons
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Prokaryote
- bacteria, bacillus, cocci, spiral
- Peptidoglycan is found in cell walls not eukaryotes
- Unicellular
- multiply by binary fission
- 50S+30S= 70S
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virulence
ability of bacteria to survive in enviroment.
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flagella
tail-like structure that helps bacteria move.
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Peritrichous
flagella all over cell
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How do flagella attached to G+ and G- bacteria
Gram+ positive stain thin wall
Gram- negative stain thick wall peptidoglycan
In both the flagella attach through hook and spindle to the cell wall
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Fimbrae
helps to attach to the host cells
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peptidoglycan layer consists of two primary sugars
- NAG- acetylglucosamine
- NAM- acetylmuramic acid
linked by 10-65 sugars polypetides
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lipopolysaccharide
many fat sugars
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Diffusion
movement from higher to lower concentration. passive process
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Facilitated diffusion
Passive process. Proteins
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Osmosis
Water follows salt movement of solvent molecules Must have semi permeable membrane
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Hypertonic
- High salt content water will flow inside cell.
- NaCL
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Hypertonic
Low salt content
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Active transport
The cell uses energy in the form of ATP to move substances across the plasma membrane. Usually from outside to inside.
Ex: Ions, amino acids, simple sugars.
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Penicillin
Interferes with peptidoglycan synthesis
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Bacterial species are differentiated by
morphology, chemical composition, nutritional requirements, biochemical activities and source of energy.
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Lipopolysaccarides
LPS cell communication
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Membrane Proteins- Fluid Mosaic Model
Model that describes the plasma membrane that allows things in and out cells
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Lysis
rupturing of the cell
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Facilitated diffussion
Does not pass through cell wall without aid from protein
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Pili
Think penis...used in exchange of DNA
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Endoplasmic Reticulum
Rough- has Ribosomes?
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Endosymbiosis
Smaller cell engulfed by larger cell. mutually beneficial relationship.
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Anabolism
Synthesis A+B= AB
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Catabolism
Decomposition AB= A+B
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Exchange
NaOH+HCL= naCL+H2O
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Water Hydrogen bonding
- Polar both positive and negative.
- "association"
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Ionization
Disassociation of salt in water.
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Three basic building blocks
- Carbohydrates
- Lipids
- Proteins A.A.
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Neuclic Acid
- DNA/RNA- Nucleotides
- ATP similar
- backbone of DNA phosphates
- ATP=phosphates
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Golgi Complex
Where lysosomes are formed. 3-20 cisterns that aid in the modification of glycoproteins, glycolipids, and lipoproteins
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Mitochondria
- Central in the production of ATP.
- 70S ribosomes.
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